Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaporthe_20ampelina_20[genbank_20GCA_5F001630405.1_202016-04-25] 904 sequences; 59,495,866 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq48 250 3e-61 seq56 105 8e-18 >seq48 Length=122101 Score = 250 bits (276), Expect = 3e-61 Identities = 1140/1784 (64%), Gaps = 59/1784 (3%) Strand=Plus/Plus Query 110331 TGAACTGAATTGGTCGGGCTTTCGCCTTTGATCGGAGATAGTACATCCCGGTCTTGAGTC 110390 ||||||| || ||| ||| |||| | ||||| |||||||| || |||||||| | Sbjct 15473 TGAACTGGATGGGTGCGGCAGCTGCCTGAGTGCGGAGGTAGTACATGCCAGTCTTGAGAC 15532 Query 110391 CTTGTTTCCATGCGTACATATGCATAGAAGAGAGCTTGGACATCGTTGGACTTTC-CATG 110449 | | ||||| || | ||||| | || |||| ||| | ||| || | |||| Sbjct 15533 CGAGCTTCCAGCCGGCGAAGTGCATGCTGGTGATCTTGCCCATGGATGG-CTCCCTCATG 15591 Query 110450 AAGAGGTTCATACTTTGACTTTGGTCAATGAAGCGCCCCCGTTGTGCCGCCATAT---CA 110506 || ||| | | ||| || ||||||||| || || | || ||||| | || Sbjct 15592 TGGATGTTGAGAGACTGAGACTGATCAATGAAGGCACCACGGTCAGCAGCCATCTGCACA 15651 Query 110507 ATGACATCCTTCATCTTA---ATTTCCCAAACTGTGCGATAGAGATTCTTGATATCATCT 110563 ||| || ||| | || ||||| || || ||||| |||||||||| | Sbjct 15652 ATGG------TCCTCTGAGAGATCTCCCAGACGGTCTTGTAGAGGGCCTTGATATCAGCC 15705 Query 110564 GGGATATCTGAGATATTCTGGATGGAACCCCCCGCCTTCACCATGAGATCCTTCATATCC 110623 ||||| | || ||||| |||||||| || | | || | | |||||| || Sbjct 15706 GGGATGCTAGGAATGTTCTGAATGGAACCATCCTCGGCGATGATACGGTTCTTCATGGCC 15765 Query 110624 TTGGACCAGAGACCAATCTTCTTGAGGTCATTGACGAGGTGCTTGTTGACAATGACAAAC 110683 | ||||| | || | || | || || ||| ||| |||||| | ||| Sbjct 15766 TCAGACCACAAGCCGAGCTCTGTCAGATCCCTGAGGAGCCAAGGGTTGACGACCTGGAAC 15825 Query 110684 TCACCTGCGAGGGTTCTTCTCAGGTAGATGTTTGTTGTGTATGGTTCAAAGCATTCATTA 110743 || || ||||| | || | |||||||||| | |||||||| |||||||| ||||| Sbjct 15826 TCGCCAGCGAGCACACGTCGCTGGTAGATGTTGGAGGTGTATGGCTCAAAGCACTCATTG 15885 Query 110744 TTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGA 110803 || |||| ||| || | || || || || ||||||||||||| ||| || ||||| ||| Sbjct 15886 TTGCCCAGGATCTGCGACGTCGACGCAGTGGGCATTGGTGCCAGCAACAGGCTGTTGCGA 15945 Query 110804 AGACCCTTCTCCTTGATGCGTTCCTTGAGAACATCCCAGTCGTAGTTGA-GCTTGGTTTC 110862 | ||| |||||||||| |||||||| |||||||||| || | | || || Sbjct 15946 ACACCAGTCTCCTTGATCTTCTCCTTGAGCGCATCCCAGTCCCAGAGGTCGGAGGGCTTG 16005 Query 110863 ACCTTCCCACATGTCAAACTGAAGCACCCCTTGGGACGCGGGAGAACCCTCAAAGGTTTC 110922 || |||| ||||||| ||||| || | ||||| || |||| ||||| | || | Sbjct 16006 ACATTCC-ACATGTCGAACTGCAGGATGCCTTGTGAGACGGGGCTGCCCTCGTATGTCTT 16064 Query 110923 ATAGGAACCTTGGGCTTCAGCCAATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGT 110982 |||| || | | | || | |||| || |||| ||||| || ||||| Sbjct 16065 GTAGGGGCCCTCCACCTTGGCAATGTCACTTGATGCGGTGAGGGCAGCGTGGTAGATGGT 16124 Query 110983 TTCAAAGATACGAGCATTCATCTCCTTGGCTTCATCTGAATCAAA-----TGCGTAGCGG 111037 || ||||| | |||| ||| ||| || || || || ||||||| | Sbjct 16125 CTCGAAGATCTGCTTGTTCAGCTCACGGGCCTCCGGGGAGTCGAAAGGCATGCGTAGTGC 16184 Query 111038 CACAAAATAAATACATCCGCGAGACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATA 111097 || || | | || || ||||| ||||| || | ||||||||||| ||||||||| Sbjct 16185 CAAGAA-----TGCGTCGGCAAGACCCTGAACGCCGACACCAATAGGTCGGTGTCGCATG 16239 Query 111098 TTAGACTTTCGCGCAGTCTCAACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTT 111157 || || || || || || || || ||||||| ||| || || Sbjct 16240 TTGCTGTTGTAGGCCTCCTTGACCGGGTAGTGGTTGACATCAATGATCTTGTTCAGGTTG 16299 Query 111158 TTGGTAACAATCTTTGTGATTTCATGAAGTTTTTCATAATCAAA--AGTGCGAGTC-TCT 111214 | || | || || | || || | | | | | | ||| ||| | Sbjct 16300 CGGACGACGACCTGGGTAACCTCGTGCAACTGCTGGAAGTTGTAGCAGTTGTTGTCGTAG 16359 Query 111215 TCATTGACATACTTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTA 111274 ||| ||||| || || || || || ||||| ||||| || || |||||| Sbjct 16360 TCA---ACATATGCGGGCAGAGCAATGGAGGCCAAGTTGCACACGGCGACCTCATCTGGG 16416 Query 111275 TCTGTGTACTCTAAAATTTCTGTACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTT 111334 | | |||||| | || || || || | |||||| || || || |||| ||||| Sbjct 16417 GCAGAGTACTCAATGATCTCAGTGCAAAGGTTGGAGCTTCGGATGGTACCCAGGTTCTTC 16476 Query 111335 TGGTTACTCTTCTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTC 111394 ||||| |||||| |||| |||||||| |||||| |||| | || ||||| ||| Sbjct 16477 TGGTTGCTCTTCCGGTTGGCGTGGTCCTTGTACAGCATGAAGGGGTTGCCAGTCTCAGTC 16536 Query 111395 TGTGATTTGAGAATAGCCTTCCAAA-CATCGGCGGCTGGTACAATGGCGTTGG---CCCG 111450 || | | |||||| || | ||| | | || | | || |||| ||| | || Sbjct 16537 TGAGCCTCGAGAATGGCATACCACAGCTTCTGGGCCTTC----ATGGTCTTGCGACCACG 16592 Query 111451 TCCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAG 111510 |||||| |||||||| |||||| || |||||||||||||| ||||| ||| Sbjct 16593 ACCCTCCTTCTCGTACTGCTCGTAGAGAGCCTCAAACTCCTCACCGTAGCAGTCGGCGAG 16652 Query 111511 ACCTGGTGCCTTGTCTGGACAGAAAAGAGACCATTGACCACCTTCCTCAACCCGCTTCAT 111570 || || || || || || | || | ||| | ||| | ||| ||||||||||| Sbjct 16653 GCCAGGACACTCGTTAGGGCACATCAGGGTCCAGTCACCGTTCTTCTCGACCCGCTTCAT 16712 Query 111571 GAAAAGGTCTGGAATCCACAGGG-ATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCAC 111629 |||||| || || ||||| |||| | | ||| ||||| | || ||| || | || Sbjct 16713 GAAAAGATCGGGGATCCAGAGGGCAAGGAAA-AGATCACGGGCTCGGATCTCCTCCTTAC 16771 Query 111630 CTTGGTTGAGTCGTAACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGA 111689 | ||||| || | ||||||||||| | | ||| ||||||||||||||||| |||| Sbjct 16772 CGTGGTTCTTGCGCAGGTCAAGGAACTCGAATACATCGGCGTGCCATGGCTCAAGGTAGA 16831 Query 111690 CTGCGATAGATCCCTTTCGACGC------CCAGCTTGATTTACATAGCGCGCTGTGGCGT 111743 |||| | || ||||| ||| | || | || || || || ||| || Sbjct 16832 TAGCGAAGGCACC---GGGACGCTTGTTGCCACCCTGGTCGACGTATCGGGCGGTGTTGT 16888 Query 111744 TAAATACGCGAAGCATTGGAATAATACCATCTGATTGACCATTTGT-CCCCCGA-ATACG 111801 | || || || |||||||| |||| |||| || ||| || || || ||| || | Sbjct 16889 TGAAGACCCGCAGCATTGGGGTAATGCCATTAGAGGTACCGTTAGTGCCAGCGATGTATG 16948 Query 111802 AGATTTATTGGCTCTCACATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGAT 111861 || |||| | | || | || || ||||| || || ||| ||| ||||| Sbjct 16949 AG--CCGGTGGCACGGATGCGGTGCACGTTCAGACCAATTCCACCCGCCATCTTAGAGAT 17006 Query 111862 TTGCGCAC-ACTCCGTAAGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGA 111920 |||| | || |||| || ||||||| || | || ||||||||| || ||| Sbjct 17007 CATAGCACAAGTCTTTAAG-GTGTCATAGATGCCCTCAATGCTGTCCTCCTTCATGTCGA 17065 Query 111921 TAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTG 111980 |||||||| |||| ||| || || || ||||||||||| | || || | | Sbjct 17066 CGAGGAAGCATGATGACAGCTGGGGCTGAGGAGTGCCAGCATTGAACAATGTGGGGGAGG 17125 Query 111981 CGTGAATGAACATACCT-TGGGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCT 112039 | || |||| | || | | |||||| || ||| ||||| | ||| || | || Sbjct 17126 CATGTGTGAAGA-ACTTGTTTGACATCAGGTTGTAGGTCTCAATGACCCTCTCGACATCG 17184 Query 112040 TCCCCGTGGATGCCGATTGCGACCCGCATGAACATGTACTGTGG 112083 || || ||| |||| ||||| ||||||| ||||| |||||| Sbjct 17185 TCTCCCCAGATACCGACAGCGACACGCATGATCATGTGCTGTGG 17228 >seq56 Length=117397 Score = 105 bits (116), Expect = 8e-18 Identities = 277/421 (66%), Gaps = 10/421 (2%) Strand=Plus/Plus Query 122371 TAGTCCCCGACCCGCTTCTCAAAGAAGTTGGTCTTCCCATCAAGGCTAATGTTTTCCATA 122430 ||||| ||||| ||||||||||||||||||||||| ||| | || ||||| ||||| Sbjct 53056 TAGTCACCGACACGCTTCTCAAAGAAGTTGGTCTTGCCACCGAGAGAGATGTTCTCCATG 53115 Query 122431 AAGTCAAATGGATTCTTCGCGTTCCAAA-----TGGGTGGCACCCCAACTTGTTTGAGGA 122485 ||||| || || ||| || || ||| | | || |||| | |||| Sbjct 53116 AAGTCGAAGGGGTTCGACGACTTGTAAACCTTCTCGTTG----CCCAGAGCGACC-AGGA 53170 Query 122486 GACGATCCGACACATACTCAATGTACTCGGACATCTTCTCAGAGTTCATACCGATGAGGT 122545 |||| || | ||| |||| ||||||| ||| | |||||||| |||| |||| Sbjct 53171 GACGGTCGGCAACAAACTCGATGTACTGCTTCATGAGGTTGGAGTTCATGCCGAGGAGGG 53230 Query 122546 TACATGGGAGTGCGTCCAAGATGAACCCTTTCTCAATCTCAACCGCCTCTTTCACGATGG 122605 ||||| || || || | |||| | ||||| || | || ||||| | | |||| Sbjct 53231 CGCATGGCAGAGCCTCAGTCAAGAACTCCTTCTCGATGGCGACGGCCTCGGTGATGATGT 53290 Query 122606 CGTGGATAGTTTCGGTAGTGGGTCTATTACGCAAAGTCTTGAAGAGCTCCACGGCAAACT 122665 | | || | | | | || | || | || ||| || ||| || | Sbjct 53291 CCTCGACACGCTGCTTGCTTGGACGGTTCCTCAGGTGAGAGAACAGGAGACAGGCGAAGT 53350 Query 122666 CCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCTGGCATGA 122725 | ||| ||||||||||| || ||||| || || || |||||| || || ||||||| Sbjct 53351 CGGTGTGCAGACCCTCATCACGAGAAATGAGCTCGTTGGAGAAGGTCAGGCCAGGCATGA 53410 Query 122726 GACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCA 122785 | || |||||||| | ||| |||| | | ||||| ||| ||||||||| ||||| | Sbjct 53411 GGCCACGCTTCTTGAGCCAGAAAATGGAGGCGAATGCGCCGCTGAAGAAGATGCCCTCGA 53470 Query 122786 C 122786 | Sbjct 53471 C 53471 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628024903238400