Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaporthe_20ampelina_20[genbank_20GCA_5F001630405.1_202016-04-25] 904 sequences; 59,495,866 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq48 215 6e-51 >seq48 Length=122101 Score = 215 bits (238), Expect = 6e-51 Identities = 1147/1810 (63%), Gaps = 39/1810 (2%) Strand=Plus/Plus Query 117805 TGAACTGAATGGGTCTCGCCTTGGCCTTTGATCGGAGGTAGTACATCCCCGTCTTGAGCC 117864 ||||||| |||||| || |||| | |||||||||||||| || |||||||| | Sbjct 15473 TGAACTGGATGGGTGCGGCAGCTGCCTGAGTGCGGAGGTAGTACATGCCAGTCTTGAGAC 15532 Query 117865 CCTGCTTCCAGGCATACATATGCATTGAGGACAACTTGGAGAGGGTTGGACTTTC-CATG 117923 | |||||||| | | ||||| || | |||| | || ||| || | |||| Sbjct 15533 CGAGCTTCCAGCCGGCGAAGTGCATGCTGGTGATCTTGCCCATGGATGG-CTCCCTCATG 15591 Query 117924 AAGAGGTTCATACTTTGGGATTGATCGATGAAGCGTCCCCGATCCGCCGCCATATCAATC 117983 || ||| | | || || ||||| |||||| || || || || ||||| | | Sbjct 15592 TGGATGTTGAGAGACTGAGACTGATCAATGAAGGCACCACGGTCAGCAGCCATCTG---C 15648 Query 117984 ACATCCTTCATCTT---GATTTCCCACACAGTCCTGTAGAGGTTCTTAATATCATCTGGG 118040 ||| || ||| ||| ||||| || ||| |||||||| ||| |||||| | ||| Sbjct 15649 ACAATGGTCCTCTGAGAGATCTCCCAGACGGTCTTGTAGAGGGCCTTGATATCAGCCGGG 15708 Query 118041 ATATCCACGA-TATTTTGGATGGATCCACCCGCCTTGACCATGAGATCCTTCATATCCTT 118099 || | | || | || || ||||| ||| || | || || | | |||||| ||| Sbjct 15709 ATG-CTAGGAATGTTCTGAATGGAACCATCCTCGGCGATGATACGGTTCTTCATGGCCTC 15767 Query 118100 TGACCAGAGACCAATCTTTTTGAGATCCTCCACGAGATGCTTATTGACAACAACAAACTC 118159 ||||| | || | || | | |||||| | ||| ||||| || ||||| Sbjct 15768 AGACCACAAGCCGAGCTCTGTCAGATCCCTGAGGAGCCAAGGGTTGACGACCTGGAACTC 15827 Query 118160 ACCCGCGAGGGTGCGTCTCAGATAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTT 118219 || ||||| |||| | | ||||| |||| |||||||||||||||||||||||||| Sbjct 15828 GCCAGCGAGCACACGTCGCTGGTAGATGTTGGAGGTGTATGGCTCAAAGCACTCATTGTT 15887 Query 118220 ACCCAAGATTTGGGCTGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAG 118279 |||| ||| || | || || || |||||||| ||||||| | |||||||| || | Sbjct 15888 GCCCAGGATCTGCGACGTCGACGCAGTGGGCATTGGTGCCAGCAACAGGCTGTTGCGAAC 15947 Query 118280 ACCCTTTTCCCTAATGCGTTCCTTGAGAGCGTCCCAGTCGTAGTTGAGCTTTGTCTCCCC 118339 ||| | ||| | || |||||||| || |||||||| || | | || | Sbjct 15948 ACCAGTCTCCTTGATCTTCTCCTTGAGCGCATCCCAGTCCCAGAGGTCGGAGGGCTTGAC 16007 Query 118340 CTGCCACATATCAAACTGGAGGATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATA 118399 | |||||| || ||||| ||||| ||||| || | || ||||| |||||| || Sbjct 16008 ATTCCACATGTCGAACTGCAGGATGCCTTGTGAGACGGGGCTGCCCTCGTATGTCTTGTA 16067 Query 118400 TGGGCCCTCAACCTCCGCCAATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTTTC 118459 |||||||| |||| || | || || |||||| ||||| || || || || Sbjct 16068 GGGGCCCTCCACCTTGGCAATGTCACTTGATGCGGTGAGGGCAGCGTGGTAGATGGTCTC 16127 Query 118460 AAAAATGCGAGCATTCATTGCCTTGGCCTCGTCGGAATC-AAACGC--GAGTCGGCACAA 118516 || || | |||| | |||||| ||| || ||| || | || | ||| Sbjct 16128 GAAGATCTGCTTGTTCAGCTCACGGGCCTCCGGGGAGTCGAAAGGCATGCGTAGTGCCAA 16187 Query 118517 AATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGA 118576 ||| | || || ||||| || || |||| ||||| || || |||| ||| || Sbjct 16188 ---GAATGCGTCGGCAAGACCCTGAACGCCGACACCAATAGGTCGGTGTCGCATGTTGCT 16244 Query 118577 CTTCCGAGCGGTCTCCACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGT 118636 || || || || || || || ||| || | | | || || || | Sbjct 16245 GTTGTAGGCCTCCTTGACCGGGTAGTGGTTGACATCAATGATCTTGTTCAGGTTGCGGAC 16304 Query 118637 GACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTGAC 118696 ||| |||| || | || || | || | | | | | | | | || | | || Sbjct 16305 GACGACCTGGGTAACCTCGTGCAACTGCTGGAAGTTGTAGCAGTTGTTGTCGTAGTCAAC 16364 Query 118697 ATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTA 118756 ||| || || || || || |||| || ||||| | | |||||| ||| ||| Sbjct 16365 ATATGCGGGCAGAGCAATGGAGGCCAAGTTGCACACGGCGACCTCATCTGGGGCAGAGTA 16424 Query 118757 CTCTATAATTTCCGTGCACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGA 118816 ||| || || || ||||| | ||| || || ||||| |||| |||||| || || Sbjct 16425 CTCAATGATCTCAGTGCAAAGGTTGGAGCTTCGGATGGTACCCAGGTTCTTCTGGTTGCT 16484 Query 118817 CTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTT 118876 ||| ||| |||||||| |||||| | || | || ||||| || || | || Sbjct 16485 CTTCCGGTTGGCGTGGTCCTTGTACAGCATGAAGGGGTTGCCAGTCTCAGTCTGAGCCTC 16544 Query 118877 GAGAATAGCCTTCCAGA-CATCGGCAGCTGGCACAGTGGCGTTG---GCTCGCCCCTCTT 118932 |||||| || | ||| | | || | || || ||| ||| | || ||||| | Sbjct 16545 GAGAATGGCATACCACAGCTTCTG-GGCCTTCA---TGGTCTTGCGACCACGACCCTCCT 16600 Query 118933 CCTCGTACTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTG 118992 |||||||| |||||| || |||||||| ||||| | || | ||| || || Sbjct 16601 TCTCGTACTGCTCGTAGAGAGCCTCAAACTCCTCACCGTAGCAGTCGGCGAGGCCAGGAC 16660 Query 118993 CCTTATCTGGGCAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGT 119052 || | ||||| | || | ||| | ||| || ||| |||||||||||||| || | Sbjct 16661 ACTCGTTAGGGCACATCAGGGTCCAGTCACCGTTCTTCTCGACCCGCTTCATGAAAAGAT 16720 Query 119053 CTGGGATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGA 119112 | ||||||||||| || ||| ||||| || || || || | || || || Sbjct 16721 CGGGGATCCAGAGGGCAAGGAAAAGATCACGGGCTCGGATCTCCTCCTTACCGTGGTTCT 16780 Query 119113 GACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTG 119172 |||| || | || || | | ||| |||||||| || || ||||| | |||| | Sbjct 16781 TGCGCAGGTCAAGGAACTCGAATACATCGGCGTGCCATGGCTCAAGGTAGATAGCGAAGG 16840 Query 119173 ACCCCTTACG---ACGACCAGCCTGGTTTACATACCTCGCAGTGGCGTTAAATACACGAA 119229 || ||| ||| |||||| || || | || ||| ||| || || || | Sbjct 16841 CACCGGGACGCTTGTTGCCACCCTGGTCGACGTATCGGGCGGTGTTGTTGAAGACCCGCA 16900 Query 119230 GCATTGGAATGATACCATCGGATTGGCCATTTGT-CCCCCGA-ATACGAGACTTATTGGC 119287 ||||||| | || |||| || || || || || ||| || ||| | |||| Sbjct 16901 GCATTGGGGTAATGCCATTAGAGGTACCGTTAGTGCCAGCGATGTATGAGCC--GGTGGC 16958 Query 119288 TCTGACATCGTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTC 119347 | || ||| | || || |||||| || || ||| ||| ||||| || || Sbjct 16959 ACGGATGCGGTGCACGTTCAGACCAATTCCACCCGCCATCTTAGAGATCATAGCACAAGT 17018 Query 119348 CGTGAGACTGCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCT 119407 | | | || | ||||| || || || ||| |||| | ||| ||||||||| Sbjct 17019 CTTTAAGGTGTCATAGATGCCCTCAATGCTGTCCTCCTTCATGTCGACGAGGAAGCATGA 17078 Query 119408 CGACATTTGAGGCCTGGGTGTACCAGCGTTGAAGAGAGTTGGTGTCGCGTGGATGAACAT 119467 |||| || ||| || || ||||| ||||| | || || | || || |||| | Sbjct 17079 TGACAGCTGGGGCTGAGGAGTGCCAGCATTGAACAATGTGGGGGAGGCATGTGTGAAGA- 17137 Query 119468 ACCT-TGGGACATCTTGTCGTAGGTCTCCAAGAC---GGCGGGAATGTCTTCCCCGTGAA 119523 || | | |||||| || ||||||||| | ||| || | |||| ||| | | Sbjct 17138 ACTTGTTTGACATCAGGTTGTAGGTCTCAATGACCCTCTCGACATCGTCTCCCCAG---A 17194 Query 119524 TACCGATCGAGACCCGCATAAACATGTATTGGGGTGTTTCCATCAGGATACCATCGAGCC 119583 |||||| | ||| ||||| | ||||| || || || | | ||||||||||| Sbjct 17195 TACCGACAGCGACACGCATGATCATGTGCTGTGGCCGCTCGACAACTTTACCATCGAGCT 17254 Query 119584 TCTGGAGGTA 119593 | ||||||| Sbjct 17255 TGAGGAGGTA 17264 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618428211682240