Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaporthe_20ampelina_20[genbank_20GCA_5F001630405.1_202016-04-25] 904 sequences; 59,495,866 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq48 282 5e-71 seq56 107 2e-18 >seq48 Length=122101 Score = 282 bits (312), Expect = 5e-71 Identities = 1151/1783 (65%), Gaps = 57/1783 (3%) Strand=Plus/Minus Query 104222 CCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGTC 104281 |||||| ||||| ||||||| || || ||||||| || || || | || ||| Sbjct 17228 CCACAGCACATGATCATGCGTGTCGCTGTCGGTATCTGGGGAGACGATGTCGAGAGGGTC 17169 Query 104282 TTGGAGACATACGACAAGATGTCCCA-AGGTATGTTCATTCACGCAACACCAACCCTCTT 104340 | ||||| ||| || |||||| | | || | |||| || || | || || | || Sbjct 17168 ATTGAGACCTACAACCTGATGTCAAACAAGT-TCTTCACACATGCCTCCCCCACATTGTT 17110 Query 104341 CAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGA 104400 ||||||||| || || ||||| |||| |||||||| ||| || |||||||| Sbjct 17109 CAATGCTGGCACTCCTCAGCCCCAGCTGTCATCATGCTTCCTCGTCGACATGAAGGAGGA 17050 Query 104401 CTCAATCAACGGTATCTATGGAACTCTTACGGAGT-GTGCGCAAATCTCAAAGTGGGCTG 104459 | || | || ||||||| || |||| || | |||| ||||| ||| ||| | Sbjct 17049 CAGCATTGAGGGCATCTATGACAC-CTTAAAGACTTGTGCTATGATCTCTAAGATGGCGG 16991 Query 104460 GGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTAT-TCGGGGG-AC 104517 | || ||||| || || | || | | |||| ||| || ||| || || Sbjct 16990 GTGGAATTGGTCTGAACGTGCACCGCATCCGTGCCACCGG--CTCATACATCGCTGGCAC 16933 Query 104518 AAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTA 104577 || ||| || |||| |||| |||||||| || || || ||| ||| || || || Sbjct 16932 TAACGGTACCTCTAATGGCATTACCCCAATGCTGCGGGTCTTCAACAACACCGCCCGATA 16873 Query 104578 TGTAAATCAAGCTGG------GCGTCGAAAGGGATCTATCGCAGTCTATCTTGAGCCATG 104631 || | || | ||| ||||| || | |||| |||| ||||||||||| Sbjct 16872 CGTCGACCAGGGTGGCAACAAGCGTCCC---GGTGCCTTCGCTATCTACCTTGAGCCATG 16816 Query 104632 GCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGCG 104691 |||||| ||| | | ||||||||||| |||| ||||| ||| | |||||| || Sbjct 16815 GCACGCCGATGTATTCGAGTTCCTTGACCTGCGCAAGAACCACGGTAAGGAGGAGATCCG 16756 Query 104692 GTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGA 104751 ||| ||||| ||| || |||||||| || ||||| ||||||||| | || ||| | Sbjct 16755 AGCCCGTGATCTTTTCCTTGCCCTCTGGATCCCCGATCTTTTCATGAAGCGGGTCGAGAA 16696 Query 104752 GAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGCCGTGGG 104811 || || | ||| | || | || || || || ||||| ||| |||| | || Sbjct 16695 GAACGGTGACTGGACCCTGATGTGCCCTAACGAGTGTCCTGGCCTCGCCGACTGCTACGG 16636 Query 104812 TGAGGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCGGGCGACTGC--GACG 104869 |||||||||||| || || ||| |||||||| | || ||||| | | | || ||| Sbjct 16635 TGAGGAGTTTGAGGCTCTCTACGAGCAGTACGAGAAGGAGGGTCGTG-GTC-GCAAGACC 16578 Query 104870 GTGCCAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACC 104928 || || | || | ||||| | || |||||| || |||| || |||||||| | || Sbjct 16577 ATG-AAGGCCCAGAAGCTGTGGTATGCCATTCTCGAGGCTCAGACTGAGACTGGCAACCC 16519 Query 104929 ATACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGAT 104988 | |||||| ||||| ||| | |||| ||||| || || ||||| ||||| || Sbjct 16518 CTTCATGCTGTACAAGGACCACGCCAACCGGAAGAGCAACCAGAAGAACCTGGGTACCAT 16459 Query 104989 CAAGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGT 105048 | || ||||| || || || || ||| | || | | | | ||||||| || || Sbjct 16458 CCGAAGCTCCAACCTTTGCACTGAGATCATTGAGTACTCTGCCCCAGATGAGGTCGCCGT 16399 Query 105049 GTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGAC--ATTT 105106 ||| ||| | || || || ||||| ||| ||||| || | ||||| || | Sbjct 16398 GTGCAACTTGGCCTCCATTGCTCTGCCCGCATATGTTGA--CTACGACAACAACTGCTAC 16341 Query 105107 GATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAGAGTTATT 105166 | | | | | ||||| ||||| | ||| | ||||| |||| | ||| Sbjct 16340 AACTTCCAGCAGTTGCACGAGGTTACCCAGGTCGTCGTCCGCAACCTGAACAAGATCATT 16281 Query 105167 GATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATT 105226 ||| || ||||| || || || || || ||| ||||||| || ||| Sbjct 16280 GATGTCAACCACTACCCGGTCAAGGAGGCCTACAACAGCAACATGCGACACCGACCTATT 16221 Query 105227 GGTCTCGGTGTTCAGGGTCTCGCGGATGTATTCATTCTTTGTCGCCACGCA-----TTTG 105281 ||| |||| ||||||||||| || || | |||| ||| | | ||||| || | Sbjct 16220 GGTGTCGGCGTTCAGGGTCTTGCCGACGCATTC-----TTGGCACTACGCATGCCTTTCG 16166 Query 105282 ATTCCGACGAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACGCCGCTC 105341 | ||| || || || | || || || || |||||||| || ||||| || | Sbjct 16165 ACTCCCCGGAGGCCCGTGAGCTGAACAAGCAGATCTTCGAGACCATCTACCACGCTGCCC 16106 Query 105342 TTGAGGC--GAGTTCAGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTC 105399 | || | | | | ||| || |||| || || || || | || | ||||| Sbjct 16105 TCACCGCATCAAGTGACA-TTGCCA-AGGTGGAGGGCCCCTACAAGACATACGAGGGCAG 16048 Query 105400 TCCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGCTTCACTA 105459 || | |||||||| | || || || || |||||| | | || || | || Sbjct 16047 CCCCGTCTCACAAGGCATCCTGCAGTTCGACATGTGGAATGTCAAGCCCTCCGACCTCTG 15988 Query 105460 CGACTGGGAAGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTCCTCAT 105519 |||||||| || |||||||| |||||||||| ||| |||| ||||| || | | Sbjct 15987 GGACTGGGATGCGCTCAAGGAGAAGATCAAGGAGACTGGTGTTCGCAACAGCCTGTTGCT 15928 Query 105520 GGCTCCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACC 105579 ||| |||||||| || || || || | || ||| |||| || ||||| |||||||| || Sbjct 15927 GGCACCAATGCCCACTGCGTCGACGTCGCAGATCCTGGGCAACAATGAGTGCTTTGAGCC 15868 Query 105580 CTACACGACGAACATCTATCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATTGTCAAC-- 105637 ||||| | |||||||| | | || | ||||| || ||||| | | |||||| Sbjct 15867 ATACACCTCCAACATCTACCAGCGACGTGTGCTCGCTGGCGAGTTCCAGGTCGTCAACCC 15808 Query 105638 -AAGCATCTCGTGGATGACCTCAAAGAGATTGGTCTCTGGTCCAAGGATATGAAGGATCT 105696 || ||| |||| || | |||| | || | ||||| ||| |||||| | | Sbjct 15807 TTGGCTCCTCAGGGAT---CTGACAGAGCTCGGCTTGTGGTCTGAGGCCATGAAGAACCG 15751 Query 105697 CATGGTGAAAGCGGGTGGTTCCATTCAAAATATTGTGGATATTCCAAATGAAATTAAGAA 105756 || | | || |||||||||||| || ||| || || ||| || ||| Sbjct 15750 TATCATCGCCGAGGATGGTTCCATTCAGAACATTCCTAGCATCCCGGCTGATATCAAGGC 15691 Query 105757 GTTGTACCGCACAGTTTGGGAAATCAAGATGAAGGATGTCATTG---ACATGGCCGCAGA 105813 | ||| || || ||||| ||| | |||| ||||| | ||||| || || Sbjct 15690 CCTCTACAAGACCGTCTGGGAGATCTCTCAG-AGGA--CCATTGTGCAGATGGCTGCTGA 15634 Query 105814 TCGTGGTCGCTTCATTGATCAAAGTCAAAGTATGAATCTCTTCATG-GAAAGTCCAACGA 105872 |||||| |||||||||||| ||| | | || || |||| | || ||| | | Sbjct 15633 CCGTGGTGCCTTCATTGATCAGTCTCAGTCTCTCAACATCCACATGAGGGAG-CCATCCA 15575 Query 105873 TGTCCAAGCTCTCTTCTATGCACATGTACAGTTGGAAGAAGGGTCTCAAAACGGGGATGT 105932 || |||| || | |||||| | | | |||||| |||||||| || || |||| Sbjct 15574 TGGGCAAGATCACCAGCATGCACTTCGCCGGCTGGAAGCTCGGTCTCAAGACTGGCATGT 15515 Query 105933 ATTACCTCCGATCTAAGGCAAAGGCGCGC-CCAATTCAGTTCA 105974 | |||||||| || ||||| || ||| || || ||||||| Sbjct 15514 ACTACCTCCGCACTCAGGCAGCTGC-CGCACCCATCCAGTTCA 15473 >seq56 Length=117397 Score = 107 bits (118), Expect = 2e-18 Identities = 153/215 (71%), Gaps = 8/215 (4%) Strand=Plus/Minus Query 94734 AGTTCCGTGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTTGATACAAAGTCGCG 94793 ||| ||||| || | ||||| || || |||||| | |||||| || || ||||| Sbjct 53565 AGTCCCGTGCATCCGCAAGAAGGCCGACTGGGCTCTCAAGTGG----ATCCAGGATCGCG 53510 Query 94794 TT----CCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTG 94849 ||| ||| ||||||| | || || || || ||||| ||||||||| | Sbjct 53509 AGTCCACCTATGCCCAGCGACTGGTTGCCTTCGCTGCCGTCGAGGGCATCTTCTTCAGCG 53450 Query 94850 GTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCT 94909 | | ||| | | |||| |||||||||||||| || |||||||| || || ||||| Sbjct 53449 GCGCATTCGCCTCCATTTTCTGGCTCAAGAAGCGTGGCCTCATGCCTGGCCTGACCTTCT 53390 Query 94910 CCAACGAGCTTATCTCTCGTGACGAGGGACTCCAC 94944 |||||||||| || |||||||| ||||| || ||| Sbjct 53389 CCAACGAGCTCATTTCTCGTGATGAGGGTCTGCAC 53355 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583254209152960