Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaporthe_20ampelina_20[genbank_20GCA_5F001630405.1_202016-04-25] 904 sequences; 59,495,866 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq399 138 1e-27 >seq399 Length=33074 Score = 138 bits (152), Expect = 1e-27 Identities = 263/380 (69%), Gaps = 8/380 (2%) Strand=Plus/Plus Query 6747 TGTGGCACGGGGGGAGCGCCATCAGAGGGAGATCCTTCGGGTTCCACGCGCACATCACGA 6806 |||||||||| || ||||||||| || || ||||||||| |||| ||| | | Sbjct 2681 TGTGGCACGGCGGCAGCGCCATCTTCTTCAGGTCGGCCGGGTTCCATGCGCTCATGATAA 2740 Query 6807 TCCTTCTGTCATCAGGGTTCCGCTTCAAGGTGTCGATCACGTACTGCAGCTGGTCCGCTC 6866 | | | ||| | |||||| |||| | ||| |||||| | ||||||||| | | Sbjct 2741 TGCGCCGGTCGTGAGGGTTGTGCTTGAGCTTGTGGATCACCTCGGCCAGCTGGTCGACGC 2800 Query 6867 CCTGTCCCGAATAGTCCGC-TTCGCTCCCCCGATACTCCGCCCCAAAGTGTCTCCACTGG 6925 |||| |||| ||||| || || || | || |||||||||||||| || | ||||||| Sbjct 2801 CCTGGCCCGTGTAGTCGGCCTTGGCGTCGACG-TACTCCGCCCCAAAATGCCGCCACTGG 2859 Query 6926 AACCCGTAGACCGGGCCCAAGTCGCCCTCCTCCCGAGATGG--GAACCCC-CGCTTGTCC 6982 |||||||| || ||||| | |||||| | || | | ||| | |||| ||| |||| Sbjct 2860 AACCCGTACACGGGGCCTAGGTCGCCGGCTTCAC--GGTGGCCCAGCCCCACGC-TGTCG 2916 Query 6983 AGAAAGTCTCGAGACCCGTGAGCGTCCCAGATCTTCACCCCCCGGGACGAGAGCTCCTTG 7042 || | || |||||||||| ||||||||||||| || ||| | ||||| | Sbjct 2917 AGGTACTCGCGAGACCCGTTGCCGTCCCAGATCTTGACGCCCTGCTCTGAGAGGGACAGC 2976 Query 7043 GTGTTCGTGGCCCCCCTCACGAACCACAGCAGCTCCTCGACCACGCCCTTCCAGTACACA 7102 | || | ||| | ||||||||||||||| ||| ||| |||| | | || Sbjct 2977 GACGATGTCTCACCCGCGATGAACCACAGCAGCTCTGCGAGAACGGCCTTTTGGAAGACG 3036 Query 7103 CGTTTCGTCGTCAGCAGCGG 7122 || || || ||||| ||||| Sbjct 3037 CGCTTTGTGGTCAGGAGCGG 3056 Score = 138 bits (152), Expect = 1e-27 Identities = 263/380 (69%), Gaps = 8/380 (2%) Strand=Plus/Minus Query 34223 CCGCTGCTGACGACGAAACGTGTGTACTGGAAGGGCGTGGTCGAGGAGCTGCTGTGGTTC 34282 ||||| ||||| || || || || | | |||| ||| ||| ||||||||||||||| Sbjct 3056 CCGCTCCTGACCACAAAGCGCGTCTTCCAAAAGGCCGTTCTCGCAGAGCTGCTGTGGTTC 2997 Query 34283 GTGAGGGGGGCCACGAACACCAAGGAGCTCTCGTCCCGGGGGGTGAAGATCTGGGACGCT 34342 | ||| | || | | ||||| | ||| || ||||||||||||| Sbjct 2996 ATCGCGGGTGAGACATCGTCGCTGTCCCTCTCAGAGCAGGGCGTCAAGATCTGGGACGGC 2937 Query 34343 CACGGGTCTCGAGACTTTCTGGACAAGCG-GGGGTTC--CCATCTCGGGAGGAGGGCGAC 34399 |||||||||| || | || |||| ||| |||| | ||| | | || | |||||| Sbjct 2936 AACGGGTCTCGCGAGTACCTCGACA-GCGTGGGGCTGGGCCACC--GTGAAGCCGGCGAC 2880 Query 34400 TTGGGCCCGGTCTACGGGTTCCAGTGGAGACACTTTGGGGCGGAGTATCGGGGGAGCGAA 34459 | ||||| || ||||||||||||||| | || |||||||||||||| || | || || Sbjct 2879 CTAGGCCCCGTGTACGGGTTCCAGTGGCGGCATTTTGGGGCGGAGTA-CGTCGACGCCAA 2821 Query 34460 -GCGGACTATTCGGGACAGGGAGCGGACCAGCTGCAGTACGTGATCGACACCTTGAAGCG 34518 || ||||| |||| ||||| | ||||||||| | |||||| ||| | |||| Sbjct 2820 GGCCGACTACACGGGCCAGGGCGTCGACCAGCTGGCCGAGGTGATCCACAAGCTCAAGCA 2761 Query 34519 GAACCCTGATGACAGAAGGATCGTGATGTGCGCGTGGAACCCGAAGGATCTCCCTCTGAT 34578 |||||| | ||| | | || | ||| |||| ||||||||| || || ||| Sbjct 2760 CAACCCTCACGACCGGCGCATTATCATGAGCGCATGGAACCCGGCCGACCTGAAGAAGAT 2701 Query 34579 GGCGCTCCCCCCGTGCCACA 34598 |||||| || |||||||||| Sbjct 2700 GGCGCTGCCGCCGTGCCACA 2681 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448257334634880