Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaporthe_20ampelina_20[genbank_20GCA_5F001630405.1_202016-04-25] 904 sequences; 59,495,866 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq48 107 3e-18 >seq48 Length=122101 Score = 107 bits (118), Expect = 3e-18 Identities = 350/539 (65%), Gaps = 15/539 (3%) Strand=Plus/Plus Query 76812 GTACGTAGATAGTACATACCAGTTTTTAGACCCAGACTCCATCCGTAGAAATGCATGCTT 76871 || || || |||||||| ||||| || ||||| || |||| ||| ||| |||||||| Sbjct 15502 GTGCGGAGGTAGTACATGCCAGTCTTGAGACCGAGCTTCCAGCCGGCGAAGTGCATGCTG 15561 Query 76872 GTCAGTTTGGAATAACTAGGATCGGCT-----ATATGAATATTCATCGACTGACTTTGAT 76926 || | ||| | |||| |||| || || || || | |||||| |||| Sbjct 15562 GTGATCTTGCC----CATGGAT-GGCTCCCTCATGTGGATGTTGAGAGACTGAGACTGAT 15616 Query 76927 CGATGAAAGCTCCTCTATCAGCCGCCATTTTTATAATGGTCTTTTGAGGAATTTCCCAAA 76986 | ||||| || || | ||||| ||||| | | ||||||| | |||| || ||||| | Sbjct 15617 CAATGAAGGCACCACGGTCAGCAGCCATCTGCACAATGGTCCTCTGAGAGATCTCCCAGA 15676 Query 76987 TAGTTTTGAAAACTTGTTTGATATCATCTGGAAGGTTTGTA---TTTTGAATGGAACCAC 77043 || ||| | | ||||||||| | || | | | | | || |||||||||||| Sbjct 15677 CGGTCTTGTAGAGGGCCTTGATATCAGCCGGGATGCTAGGAATGTTCTGAATGGAACCAT 15736 Query 77044 CATCTGATATAATTGTATTCTTTATATCATCATTCCACAATTTCCTCTCTGTTAAAACTC 77103 | || | || || ||||| || | ||| |||||| |||||| | | | | Sbjct 15737 CCTCGGCGATGATACGGTTCTTCATGGCCTCAGACCACAAGCCGAGCTCTGTCAGATCCC 15796 Query 77104 TAAGGAGATGAGGATTAACTATTTGAAATTCTCCAGACAATACTCTACGAGTGTAAATAT 77163 | ||||| ||| || || | || || || |||| | || | || ||| || | Sbjct 15797 TGAGGAGCCAAGGGTTGACGACCTGGAACTCGCCAGCGAGCACACGTCGCTGGTAGATGT 15856 Query 77164 TACTGGTATATGGTTCCACAGATTCATTGTTTCCCAAAATTTGAGCAGTAGAAGCAGTTG 77223 | ||| ||||| || | | |||||||| |||| || || | || || ||||| | Sbjct 15857 TGGAGGTGTATGGCTCAAAGCACTCATTGTTGCCCAGGATCTGCGACGTCGACGCAGTGG 15916 Query 77224 GCATAGGTGCCACCAATAAACTATTTCTGAGACCATGTGTTC-TGATTTTATCTTTTAGA 77282 |||| ||||||| ||| | || || | | |||| || | | |||| || || || || Sbjct 15917 GCATTGGTGCCAGCAACAGGCTGTTGCGAACACCA-GTCTCCTTGATCTTCTCCTTGAGC 15975 Query 77283 TATTTCCAATCCCAAAGATCTGAAGGTACAACATCCCAAAGATCGTATTGTAGAATTCC 77341 | ||| ||||| || || || || |||| ||| | ||| | || || || || Sbjct 15976 GCATCCCAGTCCCAGAGGTCGGAGGGCTTGACATTCCACATGTCGAACTGCAGGATGCC 16034 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694660950242560