Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaporthe_20ampelina_20[genbank_20GCA_5F001630405.1_202016-04-25] 904 sequences; 59,495,866 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq48 212 9e-50 >seq48 Length=122101 Score = 212 bits (234), Expect = 9e-50 Identities = 1132/1786 (63%), Gaps = 47/1786 (3%) Strand=Plus/Plus Query 75377 GTGAACTGAATGGGAGAGGATGCTGGTTTTGTACGTAGATAGTACATACCAGTTTTTAGA 75436 |||||||| ||||| | || |||| | || || || |||||||| ||||| || ||| Sbjct 15472 GTGAACTGGATGGGTGCGGCAGCTGCCTGAGTGCGGAGGTAGTACATGCCAGTCTTGAGA 15531 Query 75437 CCCAGACTCCATCCGTAGAAATGCATGCTTGTTAGTTTGGAATAACTCGGATCGGCT--- 75493 || || |||| ||| ||| |||||||| || | ||| | |||| |||| Sbjct 15532 CCGAGCTTCCAGCCGGCGAAGTGCATGCTGGTGATCTTGCC----CATGGAT-GGCTCCC 15586 Query 75494 --ATATGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGCCATTT 75551 || || || || | |||||| ||||| ||||| || || | ||||| ||||| | Sbjct 15587 TCATGTGGATGTTGAGAGACTGAGACTGATCAATGAAGGCACCACGGTCAGCAGCCATCT 15646 Query 75552 TTATAATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGATATCATCTG 75611 | ||||||| | |||| || ||||| | || ||| | | ||||||||| | | Sbjct 15647 GCACAATGGTCCTCTGAGAGATCTCCCAGACGGTCTTGTAGAGGGCCTTGATATCAGCCG 15706 Query 75612 GAAGATTTGTA---TTTTGAATGGATCCGCCATCAGATATAATTGTATTCTTGATCTCAT 75668 | | | | | || |||||||| || | || | || || ||||| || | | Sbjct 15707 GGATGCTAGGAATGTTCTGAATGGAACCATCCTCGGCGATGATACGGTTCTTCATGGCCT 15766 Query 75669 CATTCCACAATTTTCTCTCGGTTAAAACTCTAAGGAGATGAGGATTAACAATTTGAAATT 75728 || |||||| ||| || | | | || ||||| ||| || || | || || | Sbjct 15767 CAGACCACAAGCCGAGCTCTGTCAGATCCCTGAGGAGCCAAGGGTTGACGACCTGGAACT 15826 Query 75729 CTCCAGACAATACTCTTCGAGTGTAAATATTACTGGTATATGGTTCCACAGATTCATTGT 75788 | |||| | || | ||| ||| || || ||| ||||| || | | ||||||| Sbjct 15827 CGCCAGCGAGCACACGTCGCTGGTAGATGTTGGAGGTGTATGGCTCAAAGCACTCATTGT 15886 Query 75789 TTCCCAAAATTTGAGCAGTTGAAGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTGA 75848 | |||| || || | || || ||||| ||||| ||||||| ||| | || || | | Sbjct 15887 TGCCCAGGATCTGCGACGTCGACGCAGTGGGCATTGGTGCCAGCAACAGGCTGTTGCGAA 15946 Query 75849 GACCATGTGTTCT-GATTTTATCTTTTAGATATTTCCAATCCCAAAGATCTGATGGTACA 75907 |||| || | || ||| || || || || | ||| ||||| || || || || Sbjct 15947 CACCA-GTCTCCTTGATCTTCTCCTTGAGCGCATCCCAGTCCCAGAGGTCGGAGGGCTTG 16005 Query 75908 ACATCCCAGAGATCGTATTGTAGAATTCCGTTGCTAGCATATGAT-CCATTATATGTTTC 75966 |||| ||| | ||| | || || || || ||| || | | || | ||||| | Sbjct 16006 ACATTCCACATGTCGAACTGCAGGATGCC-TTGTGAGACGGGGCTGCCCTCGTATGTCTT 16064 Query 75967 GTAAGTCCCGTCCTTTTCAGCTAGTTCGCAACTCGCCTCTAACGCACCGTAATAAATTGT 76026 ||| | || ||| | || | || | || | ||| ||| || || || Sbjct 16065 GTAGGGGCCCTCCACCTTGGCAATGTCACTTGATGCGGTGAGGGCAGCGTGGTAGATGGT 16124 Query 76027 TTCGAAAATCTTCTTATTAAGATCTTGCGCTTCAAGACTATCAAAAGGATAATGTAAAAG 76086 ||||| |||| ||| || || || | || || | || ||||| ||| Sbjct 16125 CTCGAAGATCTGCTTGTTCAGCTCACGGGCCTCCGGGGAGTCGAAAGGCATGCGTAGTGC 16184 Query 76087 AATAAATGCATCTGCTAGTCCCTGAACTCCAATACCAATAGGTCTATGTCTCTTATTGGA 76146 | ||||| || || || |||||||| || | ||||||||||| |||| | | ||| Sbjct 16185 CAAGAATGCGTCGGCAAGACCCTGAACGCCGACACCAATAGGTCGGTGTCGCATGTTGCT 16244 Query 76147 AATTTCAGCTTCTGGAATAGGGTAATAATTAATATCTATAATTTTATTGAGATTTCTGAC 76206 | | || || | ||||| | || | ||| || || || || || || | ||| Sbjct 16245 GTTGTAGGCCTCCTTGACCGGGTAGTGGTTGACATCAATGATCTTGTTCAGGTTGCGGAC 16304 Query 76207 AACTACTT---TAACCACGTCCTTTAGTTTGAGAAAATCAAATTTTCCATC-TA-TCACA 76261 || || | ||||| ||| | | | || | | || || || ||| Sbjct 16305 GACGACCTGGGTAACCTCGTGCAACTGCTGGAAGTTGTAGCAGTTGTTGTCGTAGTCA-- 16362 Query 76262 AACATATTA----AGAGCTATAGATGCTAGATTACAAACGGCTACCTCATTAGCATTGGC 76317 |||||| ||||| || || || | || || ||||| ||||||| | ||| Sbjct 16363 -ACATATGCGGGCAGAGCAATGGAGGCCAAGTTGCACACGGCGACCTCATCTGG---GGC 16418 Query 76318 A---TATTGTATTATCTCCGTGCATAGATTACTACACTTGATAGTTCCAAGATTTTGTTG 76374 | || | || ||||| ||||| || || | ||| || || || || | || Sbjct 16419 AGAGTACTCAATGATCTCAGTGCAAAGGTTGGAGCTTCGGATGGTACCCAGGTTCTTCTG 16478 Query 76375 GTTGCTCTTTTTGTTA-CATGAGTCCTTATAAAGAACAAACGGAGTTCCAGTTTCAATCT 76433 ||||||||| ||| | || |||||| || || | || || | ||||| ||| ||| Sbjct 16479 GTTGCTCTTCCGGTTGGCGTG-GTCCTTGTACAGCATGAAGGGGTTGCCAGTCTCAGTCT 16537 Query 76434 GTGATTCGATAATAGATTTCCAGACGACTCTAGCTTTTATTATAGATTTGT-ATCGCTTC 76492 | | |||| ||| | | ||| | | ||| | || || | ||| | | | | Sbjct 16538 GAGCCTCGAGAATGGCATACCACA-GCTTCTGGGCCTTC--ATGGTCTTGCGACCACGAC 16594 Query 76493 TCTCTTTCA--TATTGT--GTATATAACCGTTCAAATTCATCTCCCCAAACATCATCCAA 76548 ||| ||| || || ||| | | || ||||| || || || | || | | Sbjct 16595 CCTCCTTCTCGTACTGCTCGTAGAGAGCC--TCAAACTCCTCACCGTAGCAGTCGGCGAG 16652 Query 76549 ACCAGGACATTCATTCGGACACATCAATGACCACTCACCATCTTCCTTAACCCGTTTCAT 76608 |||||||| || || || ||||||| | ||| ||||| | | || ||||| ||||| Sbjct 16653 GCCAGGACACTCGTTAGGGCACATCAGGGTCCAGTCACCGTTCTTCTCGACCCGCTTCAT 16712 Query 76609 AAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTACGTTCTTCATTTCC 76668 || ||||| || ||||| || |||| || ||||| |||| || || || || || Sbjct 16713 GAAAAGATCGGGGATCCAGAGGGCAAGGAAAAGATCACGGGCTCGGATCTCCTCCTTACC 16772 Query 76669 TGTATTCTTTTTAAGATCTAGGAACTCCATAATATCAGAATGCCATGGTTCTAGATATAT 76728 ||||| || || |||||||| | | ||| | |||||||| || || || || Sbjct 16773 GTGGTTCTTGCGCAGGTCAAGGAACTCGAATACATCGGCGTGCCATGGCTCAAGGTAGAT 16832 Query 76729 CGCCATAACACCCGGTCGTTTATTACCTCCCTGATCTATATATCTGGCAGTGTTATTATA 76788 || | |||| || || || || || ||||| || | |||| ||| ||||| || | Sbjct 16833 AGCGAAGGCACCGGGACGCTTGTTGCCACCCTGGTCGACGTATCGGGCGGTGTTGTTGAA 16892 Query 76789 AACTCTCAACATTGGAATAATGCCGTTAGATGTACCATTTGTTCCAGAAATATAACTTCC 76848 || | || |||||| ||||||| ||||| ||||| || || |||| || || || Sbjct 16893 GACCCGCAGCATTGGGGTAATGCCATTAGAGGTACCGTTAGTGCCAGCGATGTATGAGCC 16952 Query 76849 ACATGCACGAATATTACTAATAGATAGGCCTATTCCTCCTGCCATTTTAGAGATTAGAGC 76908 ||||| || | || || ||||| || ||||| |||||||| | ||| Sbjct 16953 GGTGGCACGGATGCGGTGCACGTTCAGACCAATTCCACCCGCCATCTTAGAGATCATAGC 17012 Query 76909 ACAGCGTTTCAATGTGTCATAGATGCCCTCTATACTATCATCCATCATGTTAAGAAGAAA 76968 ||| || || ||||||||||||||||| || || || ||| |||||| | || || Sbjct 17013 ACAAGTCTTTAAGGTGTCATAGATGCCCTCAATGCTGTCCTCCTTCATGTCGACGAGGAA 17072 Query 76969 ACAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAACAATGTAGGAGATGCATGAGT 77028 || |||| || | ||| ||| || ||||| |||||||| || || ||||| || Sbjct 17073 GCATGATGACAGCTGGGGCTGAGGAGTGCCAGCATTGAACAATGTGGGGGAGGCATGTGT 17132 Query 77029 GAACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAACTGCTTCTATATCCCATTGATG 77088 ||| | || | || | || ||||| || ||||| || || | ||| | Sbjct 17133 GAAGAACTTGTTTGACATCAGGTTGTAGGTCTCAATGACCCTCTCGACATCGTCTCCCCA 17192 Query 77089 AATTCCTACAGCGACACGCATCAACATATGCTGAGGTCGTTCTACA 77134 || || |||||||||||||| | ||| ||||| || || || ||| Sbjct 17193 GATACCGACAGCGACACGCATGATCATGTGCTGTGGCCGCTCGACA 17238 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712926343841280