Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaporthe_20ampelina_20[genbank_20GCA_5F001630405.1_202016-04-25] 904 sequences; 59,495,866 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq157 134 3e-26 seq427 127 5e-24 seq230 91.5 3e-13 >seq157 Length=302622 Score = 134 bits (148), Expect = 3e-26 Identities = 157/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 ||||| || || || || ||||| || ||||||||||| |||| | || | || || Sbjct 142262 AGGACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTACGGCCGTCC 142321 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || || || ||||||||||| || | ||||||||| | | || |||||||| || Sbjct 142322 TCGAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCTGGGGGAATGCCTTCCTTGTCC 142381 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 || || || |||||| | || | | |||| ||| ||| || ||||| || ||||| Sbjct 142382 TGGATCTTGGACTTGACATTGTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATAGTC 142441 Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 ||||||||||| ||||||||||||| |||||| Sbjct 142442 TTGCCCGTGAGGGTCTTCACGAAGATCTGCAT 142473 >seq427 Length=29395 Score = 127 bits (140), Expect = 5e-24 Identities = 156/213 (73%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951 |||||| ||||| || |||||||| ||||| |||||||| |||| | || | || || Sbjct 25226 GAGGACGAGATGGAGGGTAGACTCCTTTTGAATGTTGTAGTCGGAGAGGGTGCGGCCGTC 25167 Query 151952 TTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTC 152011 || || || ||||| |||||||| | ||||||||| | | ||| || ||||| || Sbjct 25166 CTCGAGTTGCTTGCCGGCAAAGATAAGACGCTGCTGGTCAGGGGGGATGCCCTCCTTGTC 25107 Query 152012 TTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGT 152071 ||| || || |||||| | || | | | || || ||| || || || || || || Sbjct 25106 TTGGATCTTGGACTTGACATTGTCGATGGTATCGGAGGACTCGACCTCGAGCGTGATGGT 25047 Query 152072 TTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 ||||| ||||| ||||||||||||| |||||| Sbjct 25046 CTTGCCTGTGAGGGTCTTCACGAAGATCTGCAT 25014 Score = 98.7 bits (108), Expect = 2e-15 Identities = 153/219 (70%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945 ||| | ||| || || || || || ||||| || ||||||||||| || | || || | Sbjct 25688 GAGACGGAGCACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCAGATAGCGTCCG 25629 Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005 |||||||| | || || ||||| || || | ||||||||| | | ||||| || Sbjct 25628 GCCATCTTCCAACTGCTTGCCAGCGAAAATGAGACGCTGCTGGTCTGGTGGAATTCCCTC 25569 Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065 ||| || ||||| || || || | || | ||||||| ||| || ||||| || Sbjct 25568 CTTGTCCTGAATCTTAGACTTCACGTTGTCAATCGTGTCTGATGACTCGACCTCAAGCGT 25509 Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || |||||||| | ||||| ||||| | |||||| Sbjct 25508 GATCGTCTTGCCCGTCAAGGTCTTGACGAAAATCTGCAT 25470 >seq230 Length=63387 Score = 91.5 bits (100), Expect = 3e-13 Identities = 128/180 (71%), Gaps = 0/180 (0%) Strand=Plus/Plus Query 151917 TTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCTTTTCCCGGCGAAGATA 151976 || ||||||||||| |||| | || | ||||| || || || ||||||||||| Sbjct 45659 TTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCCTCAAGCTGCTTGCCGGCGAAGATC 45718 Query 151977 AGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTTTGACAGTCTCT 152036 | | ||||||||| | | || || ||||| || || || || ||||| | || Sbjct 45719 AATCGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCG 45778 Query 152037 ACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAG 152096 | | |||| || ||| || ||||| || ||||| |||||||| || |||||||||||| Sbjct 45779 ATGGTGTCAGAGGACTCCACCTCAAGGGTGATAGTCTTGCCCGTCAGGGTCTTCACGAAG 45838 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153807435870584