Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaporthe_20aspalathi_20[genbank_20GCA_5F001447215.1_202015-11-20] 1,871 sequences; 55,029,878 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq561 134 3e-26 >seq561 Length=46336 Score = 134 bits (148), Expect = 3e-26 Identities = 181/252 (72%), Gaps = 0/252 (0%) Strand=Plus/Plus Query 230386 ATCATTACAGAAGCAGTTGAAAACGAAAAGGAGTTCATTTGTGACGCTATTCCATGTCGC 230445 ||||| || || || || | ||| ||||| ||| | || || ||||||| | Sbjct 8292 ATCATCACTGAGGCCGTCATGATCGAGAAGGAATTCCTGACCGAGGCCCTTCCATGCGCC 8351 Query 230446 CTTATTGGCATGAACGCTGAACTTATGGGACAGTACATCGAATTCGTAGCCGACCGCATT 230505 || | ||||||||| | | || ||| |||||||| || ||||| ||||||||| | Sbjct 8352 CTGCTCGGCATGAACTCCAACCTCATGAAGCAGTACATTGAGTTCGTCGCCGACCGCCTC 8411 Query 230506 TTTGTTGCACTTGGTTACGAGAAAGTGTACAACTCTAAGAACCCCTTTGCATTTATGGAG 230565 | || || || || ||||||| |||||||| || ||||||||| | || |||||| Sbjct 8412 CTGGTCGCTCTGGGCAACGAGAAGGTGTACAAGTCGTCGAACCCCTTCGACTTCATGGAG 8471 Query 230566 CTCATTTCGCTTCAAGGGAAGACCAACTTCTTCGAAAAGCGTGTCAGTGACTATCAGAGG 230625 ||| || || || ||||||||||||||||| ||||||||| ||||||| |||| | Sbjct 8472 AACATCTCCCTCGGTGGCAAGACCAACTTCTTCGAGAAGCGTGTCGGTGACTACCAGAAG 8531 Query 230626 CCTGGTGTGATG 230637 | || || ||| Sbjct 8532 GCCGGCGTCATG 8543 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057798641644730