Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaporthe_20aspalathi_20[genbank_20GCA_5F001447215.1_202015-11-20] 1,871 sequences; 55,029,878 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq709 214 2e-50 >seq709 Length=37314 Score = 214 bits (236), Expect = 2e-50 Identities = 291/402 (72%), Gaps = 12/402 (3%) Strand=Plus/Minus Query 145870 ACGTAGAACTGGCACAGGAGGTGGCAGGGCGGCAGGGCCATGGCGGGCAGGTCCGCCGGG 145929 ||||||||||| | | |||||| |||||||| ||||| |||||||| ||| Sbjct 18300 ACGTAGAACTGCGCGAACATGTGGCACGGCGGCAGCGCCATCTTCTTGAGGTCCGCGGGG 18241 Query 145930 TTCCAGGCGGTGAGGACGAGCCTCCTGCTCTCG---GGGTTCCTCTTGATCTCCCCTATC 145986 ||||| ||| | | || || | | || ||| |||||| || | | || ||| Sbjct 18240 TTCCACGCGCTCATGATGA---TGCGGCGGTCGTACGGGTTCGTCCTCAGCTTGTGGATC 18184 Query 145987 AGGTCCCTGAGCTGGTCCACGCCCTGCCCCCGGTAATCTGTCTTGGAGTCCACGTACGCG 146046 | || |||||||| |||||||| ||| ||| || | | ||| ||| |||||| || Sbjct 18183 ACCTCGGCCAGCTGGTCGACGCCCTGGCCCGCGTAGTCGGCCCTGGCGTCTACGTACTCG 18124 Query 146047 GCCCCGAAGTGCCTCCACTGGAACCCGTAGACGGGCCCCAGGTCCCCGGGCTCCCTGTGC 146106 || || ||||||| ||||||||||||||| ||||| || ||||| |||| ||| | ||| Sbjct 18123 GCGCCAAAGTGCCGCCACTGGAACCCGTACACGGGGCCAAGGTCGCCGGCCTCGCGGTGG 18064 Query 146107 CCCAGCCCGGCCCGGGCGAGGAAGTCCCGGGACCCGTTGGCGTCCCAGATCTTGACGCCC 146166 ||||||||| | | | ||||| | || || || |||||| |||||||||||||||| ||| Sbjct 18063 CCCAGCCCGACGCTGTCGAGGTACTCGCGCGAGCCGTTGCCGTCCCAGATCTTGACCCCC 18004 Query 146167 CTCGCGGAGAGC-TCATTG--GAGTCCGTGGACCCCCTGATGAACCAGAGCAGCTCTTCG 146223 | | |||||| || | ||| ||| ||| |||||||| |||||||| || Sbjct 18003 TGCTCCGAGAGCGACAGCGACGAG---GTGTCGCCCGATATGAACCACAGCAGCTCCGCG 17947 Query 146224 AGGACCCCCCTCCAGAAGACCCTCTTGGTGGTCAGCAGGGGG 146265 |||||| || || |||||| | ||| |||||||| || ||| Sbjct 17946 AGGACCGCCTTCTGGAAGACGCGCTTCGTGGTCAGGAGTGGG 17905 Score = 147 bits (162), Expect = 3e-30 Identities = 132/163 (81%), Gaps = 2/163 (1%) Strand=Plus/Minus Query 145690 TCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGACGTGGATGAAG-TCCCCGGGCTC 145748 || ||||||| ||||||||||||||| |||| |||||| ||| | |||||||| | Sbjct 18576 TCGACGTGGTCCGCGTAGACGTGCGCGTCGCCCATGACGTGCGTGAGGCTCCCCGGGA-C 18518 Query 145749 GAGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTAGCTGGCTATGTTGAAGGG 145808 |||| | | ||| |||| ||||| |||||||| ||||||||||| |||||||| || Sbjct 18517 GAGGTCGCACACGTGCGCGATCATGTGCGTCAGCAGCGAGTAGCTGGCGATGTTGAACGG 18458 Query 145809 CACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCAG 145851 ||| ||||| |||||||| | ||||||||||||||||||||| Sbjct 18457 CACGCCCAGGCCCATGTCGCAGGAGCGCTGGTACAGCTGGCAG 18415 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590062999578840