Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaporthe_20aspalathi_20[genbank_20GCA_5F001447215.1_202015-11-20] 1,871 sequences; 55,029,878 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq561 223 4e-53 seq427 165 8e-36 seq1489 150 2e-31 seq28 141 1e-28 >seq561 Length=46336 Score = 223 bits (246), Expect = 4e-53 Identities = 321/450 (71%), Gaps = 2/450 (0%) Strand=Plus/Plus Query 116982 AGAAGGCCGAGTGGGCGCTGCGCTGGATCGCCGGCAGAGAGGCCGCCTTCGGCGAGCGCC 117041 |||||||||| ||||| ||| |||||| | | | ||| || ||| | | |||||| Sbjct 8032 AGAAGGCCGACTGGGCTCTGAAGTGGATCCAGGACCGCGAGTCCACCTATGCCCAGCGCC 8091 Query 117042 TGGTGGCCTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTT 117101 |||| |||||||| |||||||||||| ||||||| ||| |||||| |||| || | Sbjct 8092 TGGTCGCCTTCGCTGCCGTCGAGGGCATCTTCTTCAGCGGCGCCTTCGCCTCCATCTTCT 8151 Query 117102 GGCTCAAGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGG 117161 |||||||||| || ||||||||||| || || || || ||||||||| ||||| | | Sbjct 8152 GGCTCAAGAAGCGTGGCCTCATGCCTGGTCTCACCTTTTCCAACGAGCTTATCTCTCGTG 8211 Query 117162 ACGAGGGTCTGCATTGCGACTTTGCCTGTTTGCTGTTCAAGCATTTGGTGCAGCGACCGA 117221 | ||||| ||||| |||||| ||||| |||||||| ||| | | | || || | Sbjct 8212 ATGAGGGCCTGCACACCGACTTCGCCTGCCTGCTGTTCTCGCACCTCAGGAACCGCCCAA 8271 Query 117222 GCGCGGCGCGCGTCAGGGAGATCGTCACCGACGCGGTCGCCATCGAGCAGCGCTTCCTCA 117281 || | ||||||| ||| ||| |||| || || ||| |||||| || ||||| | Sbjct 8272 GCAAGCAGCGCGTCCAGGACATCATCACTGAGGCCGTCATGATCGAGAAGGAATTCCTGA 8331 Query 117282 CCGAAGCGCTGCCGGTGCG-TCTGCTGGGACTCAATTGCGAAACGATGTCGCAATACATC 117340 |||| || || || |||| ||||| || | || | | | ||| ||| ||||| Sbjct 8332 CCGAGGCCCTTCC-ATGCGCCCTGCTCGGCATGAACTCCAACCTCATGAAGCAGTACATT 8390 Query 117341 GAGTTCGTCGCCGACAGGCTGCTGCTCGAGCTGGTCGGCGCCAAGCACTACAACACGCCC 117400 ||||||||||||||| | || ||| ||| |||| | || ||| ||||| || | Sbjct 8391 GAGTTCGTCGCCGACCGCCTCCTGGTCGCTCTGGGCAACGAGAAGGTGTACAAGTCGTCG 8450 Query 117401 AACCCGCTGGACTTTATGAACCTCATCTCC 117430 ||||| | ||||| ||| | ||||||| Sbjct 8451 AACCCCTTCGACTTCATGGAGAACATCTCC 8480 Score = 156 bits (172), Expect = 4e-33 Identities = 208/286 (73%), Gaps = 5/286 (2%) Strand=Plus/Plus Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695 || |||| |||||||| ||| ||||| || |||||||||| || ||| | || || Sbjct 7624 ATCTGGCAAATGTACAAGAAGCATGAGGCTTCTTTCTGGACCGCTGAAGAGATCGATCTC 7683 Query 116696 TCCAAGGA-CACGAGCGACTGGG---AGCGCTTGAACGACAACGAGCGCCATTTCATCAA 116751 |||||||| | | | ||||||| | ||| ||| ||| | ||||| | ||| || Sbjct 7684 TCCAAGGATCTCCA-CGACTGGAGCAACCGCCTGACCGATGATGAGCGTTACTTCGTCTC 7742 Query 116752 GCACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCG 116811 ||| | || ||||| |||||||| || ||||||||||||||||| ||||| ||||| Sbjct 7743 CCACATCCTCGCCTTCTTCGCCGCTTCAGATGGCATCGTCAACGAGAACCTGGTGGAGCG 7802 Query 116812 TTTCGCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCAT 116871 ||| ||||| || | | ||||| || |||||||||||||| |||||| || Sbjct 7803 CTTCAGCGGCGAGGTCCAAATCCCTGAGGCCCGTTGCTTCTACGGCTTCCAGATCATGAT 7862 Query 116872 GGAGAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTAC 116917 ||||||| | ||||| || | |||||| ||||| ||||| ||| Sbjct 7863 GGAGAACATCCACTCCGAGACGTATTCTTTGCTCATTGACACCTAC 7908 >seq427 Length=47822 Score = 165 bits (182), Expect = 8e-36 Identities = 175/231 (76%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || ||||||||||| ||||||||| | || || || | || Sbjct 19171 ATGCAGATCTTCGTGAAGACCCTCACGGGCAAGACCATCACCCTTGAGGTGGAGTCTTCC 19230 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | | ||||| || || | ||||| |||||||||||| | |||||| Sbjct 19231 GACACCATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCAGACCAG 19290 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || || || |||| ||| ||||| ||||| || || | ||||||||| |||||||||| Sbjct 19291 CAGCGCCTGATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACCCTCTCCGACTACAAC 19350 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGCGGC 40920 |||||||||||| |||| || || || ||| ||||| || | || || ||| Sbjct 19351 ATCCAGAAGGAGTCCACCCTCCACCTCGTGCTGCGCCTGCGTGGTGGTGGC 19401 >seq1489 Length=43664 Score = 150 bits (166), Expect = 2e-31 Identities = 165/217 (76%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 40689 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCAC 40748 |||||| || || || || || || ||||| || || ||||| |||| || || | | Sbjct 23119 AATGCAGATCTTTGTCAAGACCCTGACGGGGAAGACGATCACGCTCGAGGTGGAGTCGTC 23178 Query 40749 CGACA-GCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACC 40807 |||| | || |||| ||||| ||| |||| ||||| ||||||||||| | |||| Sbjct 23179 GGACACGATTGACAACG-TCAAGTCAAAGATTCAGGACAAGGAGGGCATCCCACCAGACC 23237 Query 40808 AGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 40867 |||| || ||||| | ||| |||||||||||||| |||| || |||||| ||||||| Sbjct 23238 AGCAGCGTCTCATTTTCGCTGGCAAACAGCTGGAAGACGGCCGGACCCTCTCTGACTACA 23297 Query 40868 ACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCG 40904 |||||||||||||| | |||||||| | ||| |||| Sbjct 23298 ACATCCAGAAGGAGTCGACGCTGCACTTGGTGCTGCG 23334 Score = 138 bits (152), Expect = 1e-27 Identities = 158/210 (75%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || ||||| ||||| ||||||||| |||| ||||| || | Sbjct 22664 ATGCAGATCTTCGTCAAGACCCTCACCGGCAAGACCATCACCCTCGAGGTCGAGTCCTCT 22723 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 || | | | |||| | ||| || |||| ||||| |||||||||||| | || || Sbjct 22724 GATACTATCGACAACG-TAAAGTCCAAGATTCAGGACAAGGAGGGCATCCCCCCTGATCA 22782 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || || |||| ||| ||||| || || || |||| ||||||||| ||||||||| Sbjct 22783 GCAGCGCCTGATCTTCGCCGGCAAGCAACTTGAGGACGGCCGCACCCTCTCCGACTACAA 22842 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 |||||||||||| | || || || || || Sbjct 22843 CATCCAGAAGGAATCAACCCTCCACCTCGT 22872 Score = 129 bits (142), Expect = 6e-25 Identities = 156/210 (74%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || ||||| ||||| ||||||||| |||| ||||| || | Sbjct 22892 ATGCAGATCTTCGTCAAGACCCTCACCGGCAAGACCATCACCCTCGAGGTCGAGTCCTCT 22951 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 || | | | |||| | ||| || |||| ||||| |||||||||||| | ||||| Sbjct 22952 GATACTATCGACAACG-TAAAGTCCAAGATTCAGGACAAGGAGGGCATCCCCCCTGACCA 23010 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || ||||||| || || || ||||| || || | || || || ||||||||| Sbjct 23011 GCAGCGCCTCATCTTTGCTGGAAAGCAGCTCGAGGATGGCCGGACTCTGTCCGACTACAA 23070 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 ||| ||||||||| | || ||||| || || Sbjct 23071 CATTCAGAAGGAGTCTACTCTGCACCTCGT 23100 >seq28 Length=192849 Score = 141 bits (156), Expect = 1e-28 Identities = 142/182 (78%), Gaps = 2/182 (1%) Strand=Plus/Plus Query 40699 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTG 40758 ||||| || || || |||||||| ||||||||| |||| || || || | |||| | | Sbjct 42387 TTCGTGAAGACCCTGACGGGCAAGACCATCACCCTCGAGGTGGAGTCCTCTGACACCATC 42446 Query 40759 CA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACT 40817 | |||| ||||| || || | ||||| |||||||||||| | |||||||| ||||| Sbjct 42447 GACAACG-TCAAGTCGAAGATCCAGGACAAGGAGGGCATCCCCCCTGACCAGCAGCGACT 42505 Query 40818 CATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAA 40877 |||| ||| ||||| ||||| || || | ||||||||| |||||||||||||||||| Sbjct 42506 GATCTTCGCCGGCAAGCAGCTTGAGGATGGCCGCACCCTCTCCGACTACAACATCCAGAA 42565 Query 40878 GG 40879 || Sbjct 42566 GG 42567 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515207150310960