Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaporthe_20aspalathi_20[genbank_20GCA_5F001447215.1_202015-11-20] 1,871 sequences; 55,029,878 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq1209 372 8e-98 >seq1209 Length=374226 Score = 372 bits (412), Expect = 8e-98 Identities = 1144/1743 (66%), Gaps = 52/1743 (3%) Strand=Plus/Plus Query 363443 TTGTTGAACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATG 363502 |||| || || || ||||| ||| | ||||||||||| |||| ||| || |||| Sbjct 92771 TTGTCGAGCGGCCACAGCACATGATCATGCGTGTTGCAGTTGGCATCTGGGGCGATGATG 92830 Query 363503 TTGATGCCGCGATTGAAACATATAAGCT----TCTAAGTGCTCGTGTATTCACGCACGCC 363558 | || | || || || || || || || || | || | ||||| || ||| Sbjct 92831 TGGAGAGGGTCATCGAGACCTACAACCTCATGTCAAA---CAAGT-TCTTCACCCATGCC 92886 Query 363559 ACGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTA 363618 |||| ||| | | ||||||||| |||| | || ||| |||| |||||||| || | Sbjct 92887 TCGCCCACACTATTCAATGCTGGCACTCCCCAGCCCCAGCTGTCATCTTGCTTCCTCGTC 92946 Query 363619 AAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATT 363678 | |||||||| || ||||||||| |||| ||||||||| |||| ||||| | || Sbjct 92947 GACATGAAGGAGGACAGCATCGAGGGCATCTATGACACACTCAAGACATGTGCCATGATC 93006 Query 363679 TCCAAGAATGCAGGCGGAATTGGTGT-ATCGATCCACAATGTTCGTGC-ACAGAACAGTT 363736 ||||||| || || || || || | | || ||||| | | ||||| || | || Sbjct 93007 TCCAAGATGGCCGGAGGCATCGGCCTGAACG-TCCACCGTATCCGTGCCACCGGCTCGT- 93064 Query 363737 ACATTCGC-GGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGAC 363795 |||| ||| ||||| || ||| || || | ||||||||| || || || || Sbjct 93065 ACAT-CGCTGGCACCAACGGTACCTCCAACGGCATCACTCCCATGCTGCGAGTCTTCAAC 93123 Query 363796 AATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTAT 363855 || ||||| | || |||||||||||||| ||||| || || || ||||| || Sbjct 93124 AACACTGCCCGTTATGTCGACCAGGGTGGCAACAAGCGTCCCGGTGCCTTCGCTATTTAC 93183 Query 363856 CTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAA 363915 |||||||| || || ||| | || ||||| || || || ||||| ||| || || Sbjct 93184 CTCGAGCCGTGGCACGCTGATGTCTTCGAGTTCCTCGACCTGCGGAAGAACCACGGTAAG 93243 Query 363916 GAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAG 363975 ||||| | || || ||||| || ||| ||| || ||| | |||| | || |||||| Sbjct 93244 GAGGAGATCCGAGCTCGTGACCTTTTCCTTGCTCTCTGGATCCCTGATCTGTTCATGAAG 93303 Query 363976 CGCGTGGAGGCAGGTAAG--AATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTT 364033 || || ||| | | | | | ||| | || | ||||| |||| || || || || Sbjct 93304 CGGGTCGAG--AAGAACGGTGACTGGACCCTTATGTGCCCCAACGAGTGCCCGGGCCTCG 93361 Query 364034 CCGATGTATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAGG 364093 |||| | ||||| || | || || || ||||| ||||| || |||||| | Sbjct 93362 CCGACTGCTACGGTGAGGAGTTTGAGGCCCTCTACGAGAAGTACGAGCAGGAGGGCCGCG 93421 Query 364094 CTCGTAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGA 364153 ||||||||| | || |||||||| |||| ||||||| | || | |||| |||| Sbjct 93422 GCCGTAAGACACTGAAGGCCCAGAAGCTGTGGTATGCCATCCTTGAGGCTCAGACCGAGA 93481 Query 364154 CAGGAACACCCTATATGTTGTACAAAGATTCGTGC-AACCGCAAGTCCAACCAGCAGCAC 364212 | || | |||| |||| |||||||||| || || ||||| ||| ||||||| || || Sbjct 93482 CTGGTAACCCCTTTATGCTGTACAAAGA-TCACGCAAACCGGAAGAGCAACCAGAAGAAC 93540 Query 364213 CTTGGTACAATTCAGCAGAGC-AACCTATGTACCGAGATTATTGAATACACCGCTCCCGA 364271 || || || | || |||| | ||||| || |||||||| || || ||| | || || || Sbjct 93541 CTGGGCACCA-TCCGCAGCTCTAACCTCTGCACCGAGATCATCGAGTACTCGGCCCCGGA 93599 Query 364272 CGAGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGTAAAAGATG---- 364327 ||| || || || ||||| || || || || || ||||| | || | ||| Sbjct 93600 TGAGGTCGCTGTCTGCAACCTGGCTTCCATTGCTCTGCCGGCATACGTCGATTATGACAA 93659 Query 364328 GTACT--TTTGACCACCAGCATCTTTATGACGTAACCTATCATGCT-ACTT--GCAATCT 364382 ||| | || |||||| || | || || || ||| | | | | |||| | Sbjct 93660 CAACTGCTACAACTTCCAGCAGCTGCACGAGGTCAC---TCAGGTTGTCGTCCGCAACTT 93716 Query 364383 CGACAAGGTTATCGACAAGAATTATTATCCAATTCC---TGAAGCCGAGCGTTC-----T 364434 ||||| ||||||| | | | ||| | || ||||| | || | | Sbjct 93717 GAACAAGATTATCGA-------TGTCAACCACTACCCGGTGAAGGAG-GCATACAACAGC 93768 Query 364435 AATATGCGTCATCGCCCGATTGGTCTTGGTGTACAGGGCCTCGCTGACGTTTTTATGATG 364494 || ||||| || || || |||||| | || || ||||| || || || | || || Sbjct 93769 AACATGCGACACCGACCTATTGGTGTCGGCGTTCAGGGTCTTGCCGATGCATTCTTGGCT 93828 Query 364495 CTCAAGATGGCATTTGATTCGCCTGACGCTCGTGTTCTAAATAAGGAGATCTTTGAAACA 364554 || ||| | || ||||| || || || |||| || || ||| | ||||| || || Sbjct 93829 CTTCGTATGCCCTTCGATTCCCCCGAGGCGCGTGAGCTGAACAAGCAAATCTTCGAGACC 93888 Query 364555 ATGTATTTTGCCGCAATGACTGCTTCGTGTGA-TTTGGCAAAAACCAAGGGAAAGTACTC 364613 || || ||| || | || || || | || ||| ||| |||| | | ||| Sbjct 93889 ATCTACCATGCTGCTCTCACAGCATCCAGCGACATTGCCAAGGTGGAAGGCACA-TACAA 93947 Query 364614 TACTTATGAGGGGTCCCCTCTTTCGCAGGGAAAATTCCAGTTTGATCTATGGAATGTCAC 364673 || || ||||| ||| | |||||||| | ||||||| || | ||||| |||| Sbjct 93948 GACATACGAGGGCAGCCCCGTGTCGCAGGGCATCCTCCAGTTCGACATGTGGAACGTCAA 94007 Query 364674 GCCATCTGTCCGATGGAACTGGGATACGCTACGTTCCAACGTTAAGAAGCATGGTACTCG 364733 ||| |||| || ||| ||||||| | || |||| | ||| || ||||| ||| Sbjct 94008 GCCTTCTGACCTGTGGGACTGGGACGCCCTCAAGGCCAAGATCAAGGAGACTGGTATTCG 94067 Query 364734 CAACTCCCTCGTTACAGCGCCCATGCCCACGGCTTCTACTGCACAGATCCTCGGAAACAA 364793 |||| | | | | || |||||||| || || || || | |||||||| || ||||| Sbjct 94068 CAACAGCTTGTTGATGGCACCCATGCCTACTGCATCCACCTCGCAGATCCTGGGCAACAA 94127 Query 364794 CGAGTGCTTCGAACCGTTTACAAGCAATCTTTATTCACGCCGGGTTCTTTCCGGAGAATT 364853 |||||||||||| || | ||| ||| | || || || || || | || || || Sbjct 94128 CGAGTGCTTCGAGCCATATACCTCCAACATCTACCAGCGACGTGTGCTCGCTGGCGAGTT 94187 Query 364854 TCCGGTAGTTAATAAGTACCTAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGACAG 364913 | ||| || || | || ||| ||| || | || | || ||||| ||| Sbjct 94188 CCAGGTCGTCAACCCTTGGCTTCTCAGGGACCTGACAGAGCTTGGCTTGTGGTCTGAGGC 94247 Query 364914 CATGAAGAACTATATCATCGCCGCTAATGGTTCTGTGCAGAACATTCCAGGATTTCCAGA 364973 |||||||||| ||||||||||| | ||||| |||||||| ||||| | | || | Sbjct 94248 CATGAAGAACCGTATCATCGCCGAGGACGGTTCCGTGCAGAATATTCCCAGCATCCCGGC 94307 Query 364974 AGATCTGAAGCCTATTTACAAAACCGTATGGGAAATTTCCATGCGAACTCTCATTGATAT 365033 ||| | ||| | | ||||| ||||| |||||||| || | | || | | | || Sbjct 94308 TGATATCAAGGCGCTGTACAAGACCGTCTGGGAAATCTCTCAGAGGACAATTGTGCAGAT 94367 Query 365034 GGCGGCCGATCGCGGTGCTTTTATCTGTCAGAGCCAGTCGTTTAACGTATTCATGACTCA 365093 ||| || || || || || || ||| ||| ||||| ||||| | |||| | Sbjct 94368 GGCTGCTGACCGTGGCGCCTTCATCGACCAGTCTCAGTCACTTAACATCCACATGCGAGA 94427 Query 365094 GCCAACCTCCGCCAAGCTTACATCCATGCATTTCTACGGGTGGAAATCCGGTCTTAAGAC 365153 |||| || | |||| | || |||||| ||| || ||||| |||||| ||||| Sbjct 94428 GCCATCCATGGGCAAGATCACCAGCATGCACTTCGCTGGCTGGAAGCTCGGTCTCAAGAC 94487 Query 365154 AGG 365156 || Sbjct 94488 TGG 94490 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303322355763122