Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaporthe_20aspalathi_20[genbank_20GCA_5F001447215.1_202015-11-20] 1,871 sequences; 55,029,878 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq1489 104 2e-17 >seq1489 Length=43664 Score = 104 bits (114), Expect = 2e-17 Identities = 153/214 (71%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057 |||||| || ||||| ||||| |||| || || | ||||| |||| ||||||||||| Sbjct 23119 AATGCAGATCTTTGTCAAGACCCTGACGGGGAAGACGATCACGCTCGAGGTGGAGTCGTC 23178 Query 25058 TGACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116 ||||| || || | ||| |||| | ||| ||||| || || || ||||| |||| Sbjct 23179 GGACACGATTGACAACGTCAAGTCAAAGATTCA-GGACAAGGAGGGCATCCCACCAGACC 23237 Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176 | ||||| | ||||| || |||||||| | ||||| | || || | || |||| Sbjct 23238 AGCAGCGTCTCATTTTCGCTGGCAAACAGCTGGAAGACGGCCGGACCCTCTCTGACTACA 23297 Query 25177 ATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 | || || || || || ||||| || || ||||| Sbjct 23298 ACATCCAGAAGGAGTCGACGCTGCACTTGGTGCT 23331 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433318118902865