Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaporthe_20aspalathi_20[genbank_20GCA_5F001447215.1_202015-11-20] 1,871 sequences; 55,029,878 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq561 138 2e-27 >seq561 Length=46336 Score = 138 bits (152), Expect = 2e-27 Identities = 172/236 (73%), Gaps = 0/236 (0%) Strand=Plus/Plus Query 243502 ATCATCACAGAAGCAGTTGAAAACGAAAAGGAATTCATTTGCGACGCTATTCCATGCCGG 243561 |||||||| || || || | ||| ||||||||| | ||| || |||||||| Sbjct 8292 ATCATCACTGAGGCCGTCATGATCGAGAAGGAATTCCTGACCGAGGCCCTTCCATGCGCC 8351 Query 243562 CTTATTGGCATGAACTCTGAACTCATGGGACAGTACATCGAATTCGTAGCCGACCGCATT 243621 || | ||||||||||| | |||||| |||||||| || ||||| ||||||||| | Sbjct 8352 CTGCTCGGCATGAACTCCAACCTCATGAAGCAGTACATTGAGTTCGTCGCCGACCGCCTC 8411 Query 243622 TTCATCGCGCTTGGTTATGAGAAAGTGTACAACTCCAAGAACCCCTTTGCCTTTATGGAG 243681 | |||| || || | ||||| |||||||| || ||||||||| | ||| |||||| Sbjct 8412 CTGGTCGCTCTGGGCAACGAGAAGGTGTACAAGTCGTCGAACCCCTTCGACTTCATGGAG 8471 Query 243682 CTCATTTCGCTTCAAGGGAAAACTAACTTCTTCGAAAAGCGTGTCAGTGATTATCA 243737 ||| || || || || || ||||||||||| ||||||||| |||| || || Sbjct 8472 AACATCTCCCTCGGTGGCAAGACCAACTTCTTCGAGAAGCGTGTCGGTGACTACCA 8527 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102853561553850