Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaporthe_20aspalathi_20[genbank_20GCA_5F001447215.1_202015-11-20] 1,871 sequences; 55,029,878 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq1209 295 7e-75 >seq1209 Length=374226 Score = 295 bits (326), Expect = 7e-75 Identities = 1076/1665 (65%), Gaps = 36/1665 (2%) Strand=Plus/Plus Query 93718 TACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGCAGG 93777 ||| | ||||| | ||||| || || ||| || |||||||| ||| | || |||| Sbjct 92710 TACCAATACTTCGGGTTCAAGACCCTCGAGCGCTCCTACCTCCTGAAGCTCGACGGCAAA 92769 Query 93778 GTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCACGAC 93837 ||| |||||| || || || || | ||||| || || | || || ||| | || Sbjct 92770 GTTGTCGAGCGGCCACAGCACATGATCATGCGTGTTGCAGTTGGCATCTGGGGCGATGAT 92829 Query 93838 ATGCCGAATGTTTTGCGGGCTTTCAGAGACATGCGGGACAAGAGGTATACCATGGCCACC 93897 || || || | | | | || |||| ||||| | ||| ||| | Sbjct 92830 GTGGAGAGGGTCATCGAGACCTACAACCTCATGTCAAACAAGTTCTTCACCCATGCCTCG 92889 Query 93898 CCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGAT-GAC 93956 || || || ||||| || || || || ||| ||| |||| || || ||||| | ||| Sbjct 92890 CCCACACTATTCAATGCTGGCACTCCCCAGCCCCAGCTGTCATCTTGCTTCCTCGTCGAC 92949 Query 93957 GAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCATCTC 94016 | |||| ||| |||| || || | |||| |||||| ||||| | ||||| Sbjct 92950 -ATGAAGGAGGACAGCATCGAGGGCATCTATGACACACTCAAGACATGTGCCATGATCTC 93008 Query 94017 AAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTA--CGTGCCAGGGGTTCCTAC 94074 || || || || ||||| | | |||||| |||| ||||||| || || ||| Sbjct 93009 CAAGATGGCCGGAGGCATCGGCCTGAACGTCCAC--CGTATCCGTGCCACCGGCTCGTAC 93066 Query 94075 ATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAAC 94134 ||| || ||||| || |||||||||||| || || ||||| || |||||||||||| Sbjct 93067 ATCGCTGGCACCAACGGTACCTCCAACGGCATCACTCCCATGCTGCGAGTCTTCAACAAC 93126 Query 94135 GCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTC 94194 | || || || || ||||||||||| | | | ||| | ||||| | || ||| Sbjct 93127 ACTGCCCGTTATGTCGACCAGGGTGGCAACAAGCGTCCCGGTGCCTTCGCTATTTACCTC 93186 Query 94195 GAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGAT 94254 ||||| |||||||| || || | ||| |||||||||| ||||||||||| || || Sbjct 93187 GAGCCGTGGCACGCTGATGTCTTCGAGTTCCTCGACCTGCGGAAGAACCACGGTAAGGA- 93245 Query 94255 CTGGAGA---GGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAA 94311 ||||| | || | ||||| ||| ||||||||| | || || || || ||||| Sbjct 93246 --GGAGATCCGAGCTCGTGACCTTTTCCTTGCTCTCTGGATCCCTGATCTGTTCATGAAG 93303 Query 94312 CGCGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCC 94371 || |||||||| ||| | ||||| ||| | || ||||| || || || || || || Sbjct 93304 CGGGTCGAGAAGAACGGTGACTGGACCCTTATGTGCCCCAACGAGTGCCCGGGCCTCGCC 93363 Query 94372 GACGTTTGTGGATCGCGTTTTGAAGACTTGTATGCTCGTTACGAATCGCAGGGCAAGGCC 94431 ||| | || | ||||| | | | || | ||||| | ||||| | | Sbjct 93364 GACTGCTACGGTGAGGAGTTTGAGGCCCTCTACGAGAAGTACGAGCAGGAGGGCCGCGGC 93423 Query 94432 AGGAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAGACG 94491 | ||| || | || |||||||||| || ||| | || | ||| ||||| Sbjct 93424 CGTAAGACACTGAAGGCCCAGAAGCTGTGGTATGCCATCCTTGAGGCTCAGACCGAGACT 93483 Query 94492 GGTACGCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACCAGCAGCACCTC 94551 |||| |||| || ||| ||| || | ||| ||| ||||||| || |||| Sbjct 93484 GGTAACCCCTTTATGCTGTACAAAGATCACGCAAACCGGAAGAGCAACCAGAAGAACCTG 93543 Query 94552 GGGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGACGAG 94611 || ||| ||||| || || ||||||||||| ||||||| | | ||||| ||| Sbjct 93544 GGCACCATCCGCAGCTCTAACCTCTGCACCGAGATCATCGAGTACTCGGCCCCGGATGAG 93603 Query 94612 ATTGCTGTGTGTAACCTGGGCTCCATCAACCTGTCCACTTTCGTGCGA-GATGCCTAC-A 94669 | ||||| || ||||||| ||||| ||| | | | ||| ||| ||| | || | Sbjct 93604 GTCGCTGTCTGCAACCTGGCTTCCATTGCTCTGCCGGCATACGT-CGATTATGACAACAA 93662 Query 94670 CGTCTACTGCTTCGTTCGATCTGGAGGAGCTTGTGAACTTCGCGGGAAGGATGGTCTTGA 94729 | |||| |||| | | ||| | ||| || | | | || | | ||| | Sbjct 93663 CTGCTACAACTTCCAGC-AGCTGCACGAG---GTCA----CTCAGGTTG--TCGTCCGCA 93712 Query 94730 ACCTGAACAGGGTAATCGACAAGAACTTCTACCCCGTCCCGGAGGCGGAGAACTCAAACC 94789 || |||||| | | ||||| ||| |||||| || |||||| | ||| ||| Sbjct 93713 ACTTGAACAAGATTATCGATGTCAACCACTACCCGGTGAAGGAGGCATACAACAGCAACA 93772 Query 94790 TGAAGCATCGGCCCATCGGCATCGGCGTCCAGGGTTTCGCGGACGCGCTGGTGATGATGC 94849 || || || || || || ||||||| |||||| | || || || | || | | Sbjct 93773 TGCGACACCGACCTATTGGTGTCGGCGTTCAGGGTCTTGCCGATGCATTCTTGGCTCTTC 93832 Query 94850 GTCTGCCCTACGACTCTGTCGACGCGGCGGGTTTGAATTTGAACATATTCGAAAGCATTT 94909 || |||||| ||| || ||| ||| | |||| | | || ||||| | ||| | Sbjct 93833 GTATGCCCTTCGATTCCCCCGAGGCGCGTGAGCTGAACAAGCAAATCTTCGAGACCATCT 93892 Query 94910 ATTACGGGGCCATGAAACAATCCGTCCACTTGGCCAGATCGGACGGCGGGCCACACGAAT 94969 | | | || | | | |||| | || | |||| ||| ||| || || | Sbjct 93893 ACCATGCTGCTCTCACAGCATCCAGCGACATTGCCAAGGTGGAAGGC---ACATACAAGA 93949 Query 94970 CGTTCCGCGGATCGCCCTTGGAACAGGGCATTTTTCAGTTCGACCTCTGGGGTGTGAAGC 95029 | | | || ||| || |||||||| | ||||||||| | ||| || |||| Sbjct 93950 CATACGAGGGCAGCCCCGTGTCGCAGGGCATCCTCCAGTTCGACATGTGGAACGTCAAGC 94009 Query 95030 CCTCGGGTCTGTACGACTGGGAAGCTCTACGCGCTGATGTTATCAA--ACAC-GGTGTGA 95086 | || | |||| |||||||| || || || | ||||| | || ||| | Sbjct 94010 CTTCTGACCTGTGGGACTGGGACGCCCTCAAGGCCAA---GATCAAGGAGACTGGTATTC 94066 Query 95087 AAAACGCGCTGCTTG-TGGCCCCCATGCCCACGGCCTCCACGGCGCAGATCCTTGGCAAC 95145 ||| ||| ||| |||| |||||||| || || ||||| |||||||||| |||||| Sbjct 94067 GCAAC-AGCTTGTTGATGGCACCCATGCCTACTGCATCCACCTCGCAGATCCTGGGCAAC 94125 Query 95146 AACGAGTCGTTCGAACCCTTCACCTCCAACGTGTACAACAGGCGGGTGCTCGCCGGGGAA 95205 ||||||| ||||| || | ||||||||| | ||| | | || |||||||| || || Sbjct 94126 AACGAGTGCTTCGAGCCATATACCTCCAACATCTACCAGCGACGTGTGCTCGCTGGCGAG 94185 Query 95206 TTCCCCGTCATCAACAAGCACCTCCTACGGGACCTGACGTCTCTGGGTGTGTGGGGTGAC 95265 |||| ||| ||||| || || |||||||||| || || ||||| ||| Sbjct 94186 TTCCAGGTCGTCAACCCTTGGCTTCTCAGGGACCTGACAGAGCTTGGCTTGTGGTCTGAG 94245 Query 95266 AAGGTCAAGAACCAACTGCTACGCGCCAACGGCTCCGTCCAGAACATCCCGCAAATACCG 95325 | ||||||| | | || |||| ||||| ||||| || || || ||| Sbjct 94246 GCCATGAAGAACCGTATCATCGCCGAGGACGGTTCCGTGCAGAATATTCCCAGCATCCCG 94305 Query 95326 GAGGACATCAAGGCGCTCTACAAGACCGTGTGGGAGATCCCGCAG 95370 | || ||||||||||| ||||||||||| ||||| ||| | ||| Sbjct 94306 GCTGATATCAAGGCGCTGTACAAGACCGTCTGGGAAATCTCTCAG 94350 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494711629661160