Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaporthe_20aspalathi_20[genbank_20GCA_5F001447215.1_202015-11-20] 1,871 sequences; 55,029,878 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq1209 268 1e-66 seq561 96.9 4e-15 >seq1209 Length=374226 Score = 268 bits (296), Expect = 1e-66 Identities = 1107/1723 (64%), Gaps = 51/1723 (3%) Strand=Plus/Minus Query 115526 TGAACTGAATGGGTCTCGCCTTGGCCTTTGATCGGAGGTAGTACATCCCCGTCTTGAGCC 115585 ||||||| |||||| || |||| | |||||||||||||| || |||||||| | Sbjct 94537 TGAACTGGATGGGTGCGGCTGCTGCCTGGGTGCGGAGGTAGTACATGCCAGTCTTGAGAC 94478 Query 115586 CCTGCTTCCAGGCATACATATGCATTGAGGACAACTTGGAGAGTGTTGGACTTTC-CATG 115644 | |||||||| || | ||||| || | |||| | | ||| || || |||| Sbjct 94477 CGAGCTTCCAGCCAGCGAAGTGCATGCTGGTGATCTTGCCCATGGATGG-CTCTCGCATG 94419 Query 115645 AAGAGGTTCATACTTTGGGATTGATCGATGAAGCGTCCCCGATCCGCCGCCATATCAATC 115704 || ||| | || || || ||||||||| || || || || ||||| | | Sbjct 94418 TGGATGTTAAGTGACTGAGACTGGTCGATGAAGGCGCCACGGTCAGCAGCCATCTG---C 94362 Query 115705 ACATCCTTCATCTT---GATTTCCCACACAGTTCTGTAGAGGTTCTTAATATCATCTGGG 115761 ||| || ||| ||||||||| || || |||| || ||| |||||| | ||| Sbjct 94361 ACAATTGTCCTCTGAGAGATTTCCCAGACGGTCTTGTACAGCGCCTTGATATCAGCCGGG 94302 Query 115762 ATATCCACGATATTTTGGATAGAGCCACCTGCCTTGACCATGAGA---TCCTTCATATCC 115818 || ||||| || | || ||| ||| | | |||| | | |||||| || Sbjct 94301 ATGCTGGGAATATTCTGCACGGA---ACCGTCCTCGGCGATGATACGGTTCTTCATGGCC 94245 Query 115819 TTTGACCAGAGACCAATCTTCTTGAGATCCTCCACGAGGTGCTTA---TTGACAACAACA 115875 | ||||| | |||| || | || ||| ||| || | ||||| || Sbjct 94244 TCAGACCACAAGCCAAGCTCTGTCAGGTCCCT---GAGAAGCCAAGGGTTGACGACCTGG 94188 Query 115876 AACTCACCCGCGAGGGTGCGTCTCAGATAGATGTTGGTCGTGTATGGCTCAAAGCACTCA 115935 ||||| || ||||| |||| | | |||||||||| || |||||||| |||||||| Sbjct 94187 AACTCGCCAGCGAGCACACGTCGCTGGTAGATGTTGGAGGTATATGGCTCGAAGCACTCG 94128 Query 115936 TTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTG 115995 ||||| |||| ||| || | ||||| || || |||||||||||||| | | ||||||| Sbjct 94127 TTGTTGCCCAGGATCTGCGAGGTGGATGCAGTAGGCATGGGTGCCATCAACAAGCTGTTG 94068 Query 115996 CGGAGACCCACCCCCCTAATGCGTTCCTTGAGGGCGTCCCAGTCGTA--GTTGAGCTTTG 116053 || | ||| | || | || ||||||||||||||||||| | | | || | Sbjct 94067 CGAATACCAGTCTCCTTGATCTTGGCCTTGAGGGCGTCCCAGTCCCACAGGTCAGAA--G 94010 Query 116054 TCTCCCCCTCCCACATATCAAACTGGAGGATACCTTGGGACGCTGGCGATCCCTCAAATG 116113 || | | |||||| || ||||||||||| || || ||| | || ||||| ||| Sbjct 94009 GCTTGACGTTCCACATGTCGAACTGGAGGATGCCCTGCGACACGGGGCTGCCCTCGTATG 93950 Query 116114 TCTCATATGGGCCCTCAACCTCCGCCAATTCGGAGCTCGCCTCGAGGGCTGCGTGATACA 116173 ||| |||| ||| || |||| || | ||| | || ||| || || || || | Sbjct 93949 TCTTGTATGTGCCTTCCACCTTGGCAATGTCGCTGGATGCTGTGAGAGCAGCATGGTAGA 93890 Query 116174 TTGTCTCAAAAATGCGAGCATTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGACG-- 116231 | ||||| || || | |||| | |||||| |||||| || | | ||| Sbjct 93889 TGGTCTCGAAGATTTGCTTGTTCAGCTCACGCGCCTCGGGGGAATCGAAGGGCATACGAA 93830 Query 116232 GCACAAAATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCAT 116291 | | || ||| |||| || ||||| || || |||| ||||| || || |||| ||| Sbjct 93829 GAGCCAAG--AATGCATCGGCAAGACCCTGAACGCCGACACCAATAGGTCGGTGTCGCAT 93772 Query 116292 ATTAGACTTTCGAGCGGTCTCCACGGGATAAAAATTCCTATCGATAACCCTATTTAGATT 116351 || || || || ||| || || || |||||||| | | || | || Sbjct 93771 GTTGCTGTTGTATGCCTCCTTCACCGGGTAGTGGTTGACATCGATAATCTTGTTCAAGTT 93712 Query 116352 TTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTC 116411 | |||||||| |||| || || |||| | | | | | | | | || | Sbjct 93711 GCGGACGACAACCTGAGTGACCTCGTGCAGCTGCTGGAAGTTGTAGCAGTTGTTGTCATA 93652 Query 116412 ATTGACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATC 116471 || ||| || || || || || || ||||| || || |||| | ||||||| | Sbjct 93651 ATCGACGTATGCCGGCAGAGCAATGGAAGCCAGGTTGCAGACAGCGACCTCATCCGGGGC 93592 Query 116472 AGTGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTG 116531 | |||||| || || || || || | || || || |||||||||| |||||| || Sbjct 93591 CGAGTACTCGATGATCTCGGTGCAGAGGTTAGAGCTGCGGATGGTGCCCAGGTTCTTCTG 93532 Query 116532 ATTTGACTTTGTGTTACACGCATCCTTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTG 116591 || ||| ||| ||| ||||| |||||| | || | || ||||| || || Sbjct 93531 GTTGCTCTTCCGGTTTGCGTGATCTTTGTACAGCATAAAGGGGTTACCAGTCTCGGTCTG 93472 Query 116592 GGACTTGAGAATAGCCTTCCATA-CATCGGCGGCTGGCACAGTGGCGTTGGCTCGC--CC 116648 | || || || || | ||| | | || | | || ||||| | | | ||| || Sbjct 93471 AGCCTCAAGGATGGCATACCACAGCTTCTGGGCCTT---CAGTGTCTTACGGCCGCGGCC 93415 Query 116649 CTCCTCCTCGTACTTTGTGTAGAGGGCCTCAAACTCTTCACCCACAGC-CTCTGAGAGCC 116707 ||||| ||||||||| |||||||||||||||||| ||| || ||| || | ||| | Sbjct 93414 CTCCTGCTCGTACTTCTCGTAGAGGGCCTCAAACTCCTCA-CCGTAGCAGTCGGCGAGGC 93356 Query 116708 CTGGTGCCTTATCTGGACAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGA 116767 | || || | || || | || | ||| | ||| || ||| ||||||||||||| Sbjct 93355 CCGGGCACTCGTTGGGGCACATAAGGGTCCAGTCACCGTTCTTCTCGACCCGCTTCATGA 93296 Query 116768 AGAGGTCTGGGATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCT 116827 | || || ||||||||||| || ||| || || ||| || || || | || | Sbjct 93295 ACAGATCAGGGATCCAGAGAGCAAGGAAAAGGTCACGAGCTCGGATCTCCTCCTTACCGT 93236 Query 116828 GATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCG 116887 | || |||| || | || || | || ||| ||||||||||| || ||||| | | Sbjct 93235 GGTTCTTCCGCAGGTCGAGGAACTCGAAGACATCAGCGTGCCACGGCTCGAGGTAAATAG 93176 Query 116888 CGATTGACCCCTTGCGACG------ACCAGCCTGGTTTACATACCTCGCCGTTGCGTTAA 116941 ||| | || | |||| ||| |||||| ||||| | || || ||| | Sbjct 93175 CGAAGGCACC---GGGACGCTTGTTGCCACCCTGGTCGACATAACGGGCAGTGTTGTTGA 93119 Query 116942 ATACGCGAAGCATTGGAATGATACCATCAGATTGGCCATTTGT-CCCCCGA-ATACGAGA 116999 | || || ||||| ||| |||| || | || || || || || ||| |||||| Sbjct 93118 AGACTCGCAGCATGGGAGTGATGCCGTTGGAGGTACCGTTGGTGCCAGCGATGTACGAGC 93059 Query 117000 CTTGTTGGCTCTGACATCGTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTG 117059 | | |||| | || | ||||| || || || || || || ||| ||| ||||| Sbjct 93058 C--GGTGGCACGGATACGGTGGACGTTCAGGCCGATGCCTCCGGCCATCTTGGAGATCAT 93001 Query 117060 TGCGCACTCCGTGAGACTGCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAG 117119 || || | |||| || | ||||| || ||||| ||| |||| | ||| ||| Sbjct 93000 GGCACATGTCTTGAGTGTGTCATAGATGCCCTCGATGCTGTCCTCCTTCATGTCGACGAG 92941 Query 117120 GAAGCAGCTCGACATTTGTGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTG 117179 |||||| |||| || ||| || || ||||| ||||| || || || | || || Sbjct 92940 GAAGCAAGATGACAGCTGGGGCTGGGGAGTGCCAGCATTGAATAGTGTGGGCGAGGCATG 92881 Query 117180 GATGAACATACCT-TGGGACATCTTATCGTAGGTCTCCAAGAC 117221 | |||| | || | | ||||| | ||||||||| | ||| Sbjct 92880 GGTGAAGA-ACTTGTTTGACATGAGGTTGTAGGTCTCGATGAC 92839 >seq561 Length=46336 Score = 96.9 bits (106), Expect = 4e-15 Identities = 299/455 (66%), Gaps = 12/455 (3%) Strand=Plus/Minus Query 127231 GTAGTCCCCGACCCGCTTCTCGAAGAAGTTTGTCTTCCCATCGAGGCTGATATTCTCCAT 127290 |||||| ||||| ||||||||||||||||| ||||| ||| ||||| ||| |||||||| Sbjct 8525 GTAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCACCGAGGGAGATGTTCTCCAT 8466 Query 127291 AAAATCAAATGGGTTCTTTGAGT--TCCAAATTGTTGGCACCCCAATCTGTTTGAGGAGA 127348 || || || |||||| || | | || || | | ||| | | ||||| Sbjct 8465 GAAGTCGAAGGGGTTCGACGACTTGTACACCTTCTCGTTGCCCAGAGC--GACCAGGAGG 8408 Query 127349 CGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATGAGGTTA 127408 || || | |||| |||||||||||| ||| | |||||||| |||| ||| Sbjct 8407 CGGTCGGCGACGAACTCAATGTACTGCTTCATGAGGTTGGAGTTCATGCCGAGCAGGGCG 8348 Query 127409 CATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGTACGATGGCG 127468 ||||| || || || | ||| ||||||| || || || || | |||| | Sbjct 8347 CATGGAAGGGCCTCGGTCAGGAATTCCTTCTCGATCATGACGGCCTCAGTGATGATGTCC 8288 Query 127469 TGAATAGTGTCCACCCCAGGTCTATTGCGTAAAGT-CTTGAAGAGTTCCA--CA-GCAAA 127524 || | | | | || | || | | | || | ||| || || || || || Sbjct 8287 TGGACGCGCTGCTTGCTTGGGCGGTT-CCTGAGGTGCGAGAACAG---CAGGCAGGCGAA 8232 Query 127525 CTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCAT 127584 || ||| || ||||| ||||| ||||| || || || || ||| ||||| ||||| Sbjct 8231 GTCGGTGTGCAGGCCCTCATCACGAGAGATAAGCTCGTTGGAAAAGGTGAGACCAGGCAT 8172 Query 127585 GAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTC 127644 ||| || |||||||| | |||||| || | || | ||| ||||||||| ||||| Sbjct 8171 GAGGCCACGCTTCTTGAGCCAGAAGATGGAGGCGAAGGCGCCGCTGAAGAAGATGCCCTC 8112 Query 127645 CACACACGCGAACGCAAATAGACGCTCGGCAAAGG 127679 || ||||| || | || |||| |||| ||| Sbjct 8111 GACGGCAGCGAAGGCGACCAGGCGCTGGGCATAGG 8077 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613492851600360