Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaporthe_20aspalathi_20[genbank_20GCA_5F001447215.1_202015-11-20] 1,871 sequences; 55,029,878 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq1209 125 1e-23 >seq1209 Length=374226 Score = 125 bits (138), Expect = 1e-23 Identities = 404/609 (66%), Gaps = 16/609 (3%) Strand=Plus/Minus Query 203839 CTTGTCCACCGTGAACTGAATGGCGTTCACGGCAG--GCCTGCTT-CTCAGATAGTACAT 203895 || ||| || |||||||| |||| || | ||| | ||||| | | || |||||||| Sbjct 94548 CTGGTCGACAGTGAACTGGATGG-GTGC--GGCTGCTGCCTGGGTGCGGAGGTAGTACAT 94492 Query 203896 GCCGGTCTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTT 203955 ||| ||||| || || || ||| || | ||||||| | | |||| || | Sbjct 94491 GCCAGTCTTGAGACCGAGCTTCCAGCCAGCGAAGTGCATGCTGGTGATCTTGCCCATGGA 94432 Query 203956 GGGGTCGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCC-CGATCTG 204014 || || |||||| ||||| || ||||| ||||||||||| |||||| || || | Sbjct 94431 TGGCTCTCGCATGTGGATGTTAAGTGACTGAGACTGGTCGATGAA-GGCGCCACGGTCAG 94373 Query 204015 CGGCCATATTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTGAACA-CGTCTCTG 204073 | ||||| | | ||| ||| |||| || || ||||| || |||||| ||| || || || Sbjct 94372 CAGCCATCTGCACAATTGTCCTCTGAGAGATTTCCCAGACGGTCTTGTACAGCGCCT-TG 94314 Query 204074 GTGTGTTGAGGCACATCTTCCCACGTCCTGATCG-AGCCGTTGTCGGCCATCAGTCTCAT 204132 | | || | || | | ||| || | |||| ||||| || | | | Sbjct 94313 ATATCAGCCGGGATG-CTGGGAATATTCTGCACGGAACCGTCCTCGGCGATGATACGGTT 94255 Query 204133 CCTCGTCTCCTCCCCCCACATGCCCAAC-CTGATCAGCTCCCGCACCAGGTGGGGGTTGA 204191 | || | |||| ||||| ||| | | ||| |||| |||| | || ||||||| Sbjct 94254 CTTCATGGCCTCAGACCACAAGCCAAGCTCTG-TCAGGTCCCTGAGAAGCCAAGGGTTGA 94196 Query 204192 TGATCTGAAAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTGAATGGTTCGA 204251 || ||| || || || | ||||| | ||| | | | |||| ||| |||| |||| Sbjct 94195 CGACCTGGAACTCGCCAGCGAGCACACGTCGCTGGTAGATGTTGGAGGTATATGGCTCGA 94136 Query 204252 ACGCCTCGTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCCAGGAGCA 204311 | |||||||||||| | ||||| | |||| || || |||||||| |||| | || Sbjct 94135 AGCACTCGTTGTTGCCCAGGATCTGCGAGGTGGATGCAGTAGGCATGGGTGCCATCAACA 94076 Query 204312 GGGAGTTGCGCACACC-GTATTTTTGGACCCTGCGCTTCAGAGAGGTCCAGTCGTGCATC 204370 | |||||| | ||| || | || || | || ||| || | | |||||| || Sbjct 94075 AGCTGTTGCGAATACCAGTCTCCTT-GATCTTGGCCTTGAGGGCGTCCCAGTCCCACAGG 94017 Query 204371 GCACTGGGTTTCACGCCCCACATGTCGAACTGAAAGATGCCTTGACTGACTGGGCTGCCC 204430 || || || ||| ||||||||||||||| | |||||| || || ||||||||| Sbjct 94016 TCAGAAGGCTTGACGTTCCACATGTCGAACTGGAGGATGCCCTGCGACACGGGGCTGCCC 93957 Query 204431 TTGTACGTC 204439 | ||| ||| Sbjct 93956 TCGTATGTC 93948 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795136603307760