Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaporthe_20aspalathi_20[genbank_20GCA_5F001447215.1_202015-11-20] 1,871 sequences; 55,029,878 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq576 342 7e-89 seq461 104 3e-17 seq697 95.1 2e-14 >seq576 Length=224932 Score = 342 bits (378), Expect = 7e-89 Identities = 712/1059 (67%), Gaps = 6/1059 (1%) Strand=Plus/Plus Query 7022 ATGGCGGCTTGGACCGTCGCCCCGTATGCGACCGCCTCATCGGGGTTAATCGTTTTATTC 7081 || ||||| || || | || || || || || ||||| |||||||| || | || || Sbjct 100377 ATTGCGGCCTGCACGGCTGCACCATAGGCCACAGCCTCGTCGGGGTTGATGGACTTGTTG 100436 Query 7082 AGTTCTTTACCGTTAAAATAATCCGATAACATTTGTTGAATTTTCGGGATTCGTGTCGAT 7141 | || || ||||| || || || | | | | || || ||||| || || || Sbjct 100437 GGCTCCTTTCCGTTGAAGTAGTCGGTGATGAGCTTCTGGATACGGGGGATACGGGTGGAA 100496 Query 7142 CCACCGACCAAAACGATTTCATTCACTTTCGATTTATCGATCTTTGAGTCTCGAAGTGTT 7201 || ||||| | ||||| || | || | || || |||||||| | ||| || Sbjct 100497 CCGCCGACGAGGACGATCTCGTGAACCTGGGACTTGTCGATCTTGGCGTCGGTCAGGACA 100556 Query 7202 TTTTCGACAGGTTCCATACATTTACGGAACAAGTCCATACACAGTTCCTCAAAACGTGCA 7261 ||||| || | || ||||||| |||| ||||| ||||| ||||| ||| Sbjct 100557 CGGTCGACGGGCTGCAGGGTGGAGCGGAACAGGTCCTGGCACAGCTCCTCGAAACGAGCA 100616 Query 7262 CGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAATCAATTTCAATGGTTGTT 7321 ||||| ||||| || ||||| || | || ||||| | || || || || |||| || Sbjct 100617 CGGGTGATGGAGGTGTAGAAGTCGATACCCTCGTAGAGGGAGTCGATCTCGATGGAGGTC 100676 Query 7322 TGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGG 7381 ||||| | ||||| | |||||||| || ||||| || || || || | |||||| ||| Sbjct 100677 TGTGCAGAGGAAGACAGAGTTCGCTTGGCACGCTCGCAAGCAGTGCGGAGACGACGCAGG 100736 Query 7382 GCACGCGGGTTACCGGAAATATCTTTCTTATGTTTACGTTTAAACTCTTCAGAGAAGTGT 7441 ||||| | ||| | | || ||||| || || || || ||||| | |||||| Sbjct 100737 GCACGAGCGTTGGTGCTGAGGTCCTTCTTGTGCTTGCGCTTGAACTCGTTTACGAAGTGG 100796 Query 7442 CGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTG 7501 | ||| | || || || |||||||||| ||| ||||| || || || | ||| Sbjct 100797 TTGACGAGACGGTTGTCAAAGTCCTCACCACCCAGGTGAGTATCTCCGGCAGTAGACTTG 100856 Query 7502 ACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGG 7561 || || |||||||| | || ||| | | | ||| ||||| || |||||||| ||||| Sbjct 100857 ACCTCGAAGATACCCTCCTCGATGGTCAGGAGCGAGACATCGAAAGTACCACCGCCCAGA 100916 Query 7562 TCAAAAATGAGTACGTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCC 7621 || || || || ||||| ||| | || ||||| || |||||||| || || || Sbjct 100917 TCGAAGATCAGGACGTTGCGCTCGCCCTCGACCTTCTTGTCAAGACCGTAGGCAATGGCG 100976 Query 7622 GCCGCCGTTGGTTCATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCT 7681 || || || || || || || ||||| ||| ||||||||||||||| | || || Sbjct 100977 GCAGCGGTGGGCTCGTTGATGATACGCAGAACGTTCAGGCCAGCAATGAGACCAGCGTCC 101036 Query 7682 TTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTG 7741 || || || || || || || ||||| |||||||| ||||| || | ||| |||| || Sbjct 101037 TTGGTGGCCTGACGCTGAGAGTCGTTGAAGTAGGCGGGGACGGTGATGACAGCGTTGTTG 101096 Query 7742 ACTTTCTTACCGAGATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAA 7801 || | |||||| || | || ||| | || ||| ||||| || ||||| || || Sbjct 101097 ACGGTGCCACCGAGGTAAGCCTCAGCGGTCTCACGCATCTTGGTGAGGACCATGGAGGAG 101156 Query 7802 ATCTCTTCAGCCGCAAACTGTTTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTA 7861 |||||||| | | || || || ||||| || || || || || || |||| ||| Sbjct 101157 ATCTCTTCGGGGGTGAAGGTCTTGGTCTCACCCTTGAACTCGACCTCGATGTTGGGCTTA 101216 Query 7862 TCCGCAGCACCGGGGATAACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGG 7921 | | || ||| ||| | | | | ||||| ||| | || |||| || Sbjct 101217 CCACCCTTCTCGACGAT---CTTGAAGGGGAAGTGCTTCATGTCGGCCTGAACCTCAGGG 101273 Query 7922 TCCGAAAACTTTCTTCCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATG 7981 ||| ||||| | || || | ||||||||||| || || ||||| | |||||||||| Sbjct 101274 TCCTGGAACTTGCGGCCAATCAACCGCTTTGCATCGAAGACGGTGTTGTGGGGGTTCATG 101333 Query 7982 GCTGTTTGGTTCTTCGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACG 8041 || |||||||| || || || ||||| ||||| || | | || || || |||||| Sbjct 101334 GCGACCTGGTTCTTGGCGGCATCTCCGATCAGACGCTC---AGTGTCGGTGAAAGCGACG 101390 Query 8042 TACGATGGGGTCGTTCGATTCCCTTGGTCGTTCGCAATA 8080 | || || || || || || || |||||||| || ||| Sbjct 101391 AAGGAAGGTGTGGTCCGGTTTCCCTGGTCGTTTGCGATA 101429 >seq461 Length=169429 Score = 104 bits (114), Expect = 3e-17 Identities = 235/353 (67%), Gaps = 3/353 (1%) Strand=Plus/Plus Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 ||||| || |||||||| | || || || || ||||| || ||| || |||| ||| Sbjct 153388 TCGAAGTCCTCACCACCGAGATGGGTGTCGCCAGCGGTAGCCAAGACCTCGAAGACACCC 153447 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576 || || | || || ||||| || ||||| ||||| || || | | || | Sbjct 153448 TGGTCGATAGAGAGCAGGGAGACATCGAAAGTACCGCCACCAAGATCGTAGACGATAA-- 153505 Query 7577 TTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCA 7636 || | ||| | | | |||| || || ||||| |||||||| || || || || || Sbjct 153506 -TCTGACGCTCGCCCTCGGTCTTGTCCAGGCCGTATGCGATAGCAGCGGCGGTGGGCTCG 153564 Query 7637 TTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGT 7696 |||| ||||| || ||| || || ||||| | | || || || || || || | Sbjct 153565 TTAACGATACGGAGGACGTTGAGACCGGCAATGATACCGGCGTCCTTGGTGGCCTGCCTC 153624 Query 7697 TGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGA 7756 || ||||| |||||||||||||| || || || |||| ||||| |||| ||||| Sbjct 153625 TGGTTGTCGTTGAAGTAGGCCGGGACGGTGACAACGGCGTGGGTGACCTTCTCGCCGAGG 153684 Query 7757 TACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTC 7809 || || || | || ||||| ||| |||| ||| | || ||||| || Sbjct 153685 TAGTTCTCGGCCACCTCCTTCATCTTGCCCAGAATCATGGCGGAGATCTCCTC 153737 >seq697 Length=20888 Score = 95.1 bits (104), Expect = 2e-14 Identities = 187/276 (68%), Gaps = 3/276 (1%) Strand=Plus/Plus Query 7507 AAAGATACCTCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAA 7566 ||| | |||||||| |||||| | | |||||||| || ||||||||||| || || | Sbjct 3324 AAATACACCTCCTTGAATGTTAAGGAGGGAAACATCGAAAGTACCACCACCAAGATCGTA 3383 Query 7567 AATGAGTACGTT---CGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGC 7623 ||||| ||||| | | || | ||||| | |||||||| ||||| || || Sbjct 3384 GATGAGAACGTTGCGCTCCTTGTTGGACTTGTTGGAGCCAAGACCGTAAGCGATGGCGGC 3443 Query 7624 CGCCGTTGGTTCATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTT 7683 || || || || || || ||||| || ||| || || | || | | || || || Sbjct 3444 AGCGGTGGGCTCGTTGATGATACGCAGGACGTTGAGACCGGAGATTGAACCGGCGTCCTT 3503 Query 7684 CGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGAC 7743 || || || || || ||||| |||||||| ||||| || | ||| || | | ||| Sbjct 3504 GGTGGCCTGGCGCTGGTTGTCGTTGAAGTAGGCAGGGACGGTGATGACGGCCTTCTCGAC 3563 Query 7744 TTTCTTACCGAGATACGATTCCGCGATATCTTTCAT 7779 ||||| ||||| | || ||||| || ||||| Sbjct 3564 CTTCTTGCCGAGCTTGACCTCGGCGATCTCCTTCAT 3599 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635117945831640