Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaporthe_20aspalathi_20[genbank_20GCA_5F001447215.1_202015-11-20] 1,871 sequences; 55,029,878 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq1209 203 4e-47 >seq1209 Length=374226 Score = 203 bits (224), Expect = 4e-47 Identities = 1127/1770 (64%), Gaps = 45/1770 (3%) Strand=Plus/Minus Query 105558 TGAACTGAATTGGGCGCGCCTT-TGCCTTAGATCGGAGATAGTACATCCCGGTCTTGAGT 105616 ||||||| || ||| ||| || ||||| | ||||| |||||||| || |||||||| Sbjct 94537 TGAACTGGAT-GGGTGCGGCTGCTGCCTGGGTGCGGAGGTAGTACATGCCAGTCTTGAGA 94479 Query 105617 CCTTGTTTCCACGCGTACATATGCATAGAAGAGAGCTTGGACATCGTTGGACTTTC-CAT 105675 || | ||||| | | ||||| | || |||| ||| | ||| || || ||| Sbjct 94478 CCGAGCTTCCAGCCAGCGAAGTGCATGCTGGTGATCTTGCCCATGGATGG-CTCTCGCAT 94420 Query 105676 GAAAAGATTCATACTTTGACTCTGGTCAATGAAGCGACCACGTTGTGCCGCCATATCAAT 105735 | | || | ||| |||||| |||||| ||||| | || ||||| | | Sbjct 94419 GTGGATGTTAAGTGACTGAGACTGGTCGATGAAGGCGCCACGGTCAGCAGCCATCTGCA- 94361 Query 105736 GACATCCTTCATCTT---GATTTCCCACACTGTGCGGTAGAGATTCTTGATATCATCTGG 105792 || || ||| ||||||||| || || ||| || |||||||||| | || Sbjct 94360 --CAATTGTCCTCTGAGAGATTTCCCAGACGGTCTTGTACAGCGCCTTGATATCAGCCGG 94303 Query 105793 GATATCTGAGA-TATTTTGAATTGAACCCCCCGCCTTGACCATGAGATCCTTCATATCCT 105851 ||| ||| || |||| || | ||||| || | || || | | |||||| ||| Sbjct 94302 GATG-CTGGGAATATTCTGCACGGAACCGTCCTCGGCGATGATACGGTTCTTCATGGCCT 94244 Query 105852 TGGACCAAAGACCAATCTTCTTGAGATCATTGACGAGATGCTTGTTGACAATCACAAACT 105911 ||||| | |||| || | || || ||| || |||||| | | |||| Sbjct 94243 CAGACCACAAGCCAAGCTCTGTCAGGTCCCTGAGAAGCCAAGGGTTGACGACCTGGAACT 94184 Query 105912 CTCCCGCGAGGGTTCTTCTCAGATAGATGTTCGTCGTGTAGGGTTCAAAGCATTCATTAT 105971 | || ||||| | || | | |||||||| | || || || || ||||| || || | Sbjct 94183 CGCCAGCGAGCACACGTCGCTGGTAGATGTTGGAGGTATATGGCTCGAAGCACTCGTTGT 94124 Query 105972 TACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAA 106031 | |||| ||| || | |||||| || || ||||| ||||||||||| | ||||| |||| Sbjct 94123 TGCCCAGGATCTGCGAGGTGGATGCAGTAGGCATGGGTGCCATCAACAAGCTGTTGCGAA 94064 Query 106032 GACCCTTTTCCTTGATGCGTTCCTTGAGAACATCCCAGTCGTA--GTTGAGCTTGGTTTC 106089 ||| | |||||||| ||||||| | |||||||| | | | || || || Sbjct 94063 TACCAGTCTCCTTGATCTTGGCCTTGAGGGCGTCCCAGTCCCACAGGTCAGAA-GGCTTG 94005 Query 106090 ACCTTCCCACATATCAAATTGAAGCACCCCTTGGGACGTGGGAGAACCCTCAAATGTCTC 106149 || |||| |||| || || || || | || || ||| ||| ||||| |||||| Sbjct 94004 ACGTTCC-ACATGTCGAACTGGAGGATGCCCTGCGACACGGGGCTGCCCTCGTATGTCTT 93946 Query 106150 ATAGGAACCTTGGGCTTCAGCCAATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGT 106209 || | |||| | | || | || | | || || | || || || ||||| Sbjct 93945 GTATGTGCCTTCCACCTTGGCAATGTCGCTGGATGCTGTGAGAGCAGCATGGTAGATGGT 93886 Query 106210 TTCAAAGATACGAGCATTCATCTCCTTGGCTTCATCTGAATCAAATG-CGTA-GCGGCAC 106267 || ||||| | |||| ||| || || ||||| || | | || | | | Sbjct 93885 CTCGAAGATTTGCTTGTTCAGCTCACGCGCCTCGGGGGAATCGAAGGGCATACGAAGAGC 93826 Query 106268 AAAATAAATACATCCGCGAGACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTA 106327 || ||| |||| || ||||| ||||| || | ||||||||||| ||||||||| || Sbjct 93825 CAAG--AATGCATCGGCAAGACCCTGAACGCCGACACCAATAGGTCGGTGTCGCATGTTG 93768 Query 106328 GACTTTCGCGCAGTCTCAACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTG 106387 || || || || || || || || || | ||| | || | Sbjct 93767 CTGTTGTATGCCTCCTTCACCGGGTAGTGGTTGACATCGATAATCTTGTTCAAGTTGCGG 93708 Query 106388 GTAACAATCTTTGTGATTTCATGAAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCATTG 106447 |||| || |||| || || || | | | | | | | || | || | Sbjct 93707 ACGACAACCTGAGTGACCTCGTGCAGCTGCTGGAAGTTGTAGCAGTTGTTGTCATAATCG 93648 Query 106448 ACATACTTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTG 106507 || || || || || || || |||| ||||| ||||| ||||||| | | | Sbjct 93647 ACGTATGCCGGCAGAGCAATGGAAGCCAGGTTGCAGACAGCGACCTCATCCGGGGCCGAG 93588 Query 106508 TACTCTAAAATTTCTGTACACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTA 106567 ||||| | || || || || | ||| || || || || |||| ||||| ||||| Sbjct 93587 TACTCGATGATCTCGGTGCAGAGGTTAGAGCTGCGGATGGTGCCCAGGTTCTTCTGGTTG 93528 Query 106568 CTCTTTTTGTT-GCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGA 106626 ||||| ||| || | ||| ||||| ||||| |||| | || ||||| ||||| | Sbjct 93527 CTCTTCCGGTTTGCGTG-ATCTTTGTACAGCATAAAGGGGTTACCAGTCTCGGTCTGAGC 93469 Query 106627 CTTGAGAATTGCCTTCCACA-CATCGGCGGCTGGTACAATGGCGTT-GGCC-CGTCCCTC 106683 || || || || | ||||| | || | | || || || | | |||| || ||||| Sbjct 93468 CTCAAGGATGGCATACCACAGCTTCTGGGCCTT---CAGTGTCTTACGGCCGCGGCCCTC 93412 Query 106684 CGCCTCGTACTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGG 106743 | ||||||||| ||||||||| |||||||||||||| ||||| ||| || || Sbjct 93411 CTGCTCGTACTTCTCGTAGAGGGCCTCAAACTCCTCACCGTAGCAGTCGGCGAGGCCCGG 93352 Query 106744 TGCCTTGTCTGGACAGAAAAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAAAG 106803 || || || || | ||| | ||| | ||| || ||| |||||||||||||| || Sbjct 93351 GCACTCGTTGGGGCACATAAGGGTCCAGTCACCGTTCTTCTCGACCCGCTTCATGAACAG 93292 Query 106804 GTCTGGAATCCACAG-GGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGT 106862 || || ||||| || | | | ||| || || | | || ||| || | ||| |||| Sbjct 93291 ATCAGGGATCCAGAGAGCAAGGAAA-AGGTCACGAGCTCGGATCTCCTCCTTACCGTGGT 93233 Query 106863 TGAGTCGTAACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGA 106922 | || | || |||||||| | || ||| |||||||| ||||| || || | |||| Sbjct 93232 TCTTCCGCAGGTCGAGGAACTCGAAGACATCAGCGTGCCACGGCTCGAGGTAAATAGCGA 93173 Query 106923 TAGATCCCTTTCGACGC------CCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATA 106976 | || ||||| ||| | || | ||||| || || ||| ||| || | Sbjct 93172 AGGCACC---GGGACGCTTGTTGCCACCCTGGTCGACATAACGGGCAGTGTTGTTGAAGA 93116 Query 106977 CGCGAAGCATTGGAATAATACCATCTGATTGACCATTTGT-CCCCCGA-ATACGAGATTT 107034 | || ||||| ||| | || || | || ||| || || || ||| |||||| Sbjct 93115 CTCGCAGCATGGGAGTGATGCCGTTGGAGGTACCGTTGGTGCCAGCGATGTACGAG--CC 93058 Query 107035 ATTGGCTCTCACATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGC 107094 |||| | | | |||| || || || || || || ||| ||| ||||| || Sbjct 93057 GGTGGCACGGATACGGTGGACGTTCAGGCCGATGCCTCCGGCCATCTTGGAGATCATGGC 92998 Query 107095 ACACTCCGTAAGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAA 107154 ||| | | || || ||||||| || | ||| ||||||||| || ||| ||||| Sbjct 92997 ACATGTCTTGAGTGTGTCATAGATGCCCTCGATGCTGTCCTCCTTCATGTCGACGAGGAA 92938 Query 107155 GCAACTGGACATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAAT 107214 |||| |||| ||| || || || ||||||||||| || || || | || || | Sbjct 92937 GCAAGATGACAGCTGGGGCTGGGGAGTGCCAGCATTGAATAGTGTGGGCGAGGCATGGGT 92878 Query 107215 GAACATACCT-TGGGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGT 107273 ||| | || | | ||||| || ||| ||||| | ||| || | || || || Sbjct 92877 GAAGA-ACTTGTTTGACATGAGGTTGTAGGTCTCGATGACCCTCTCCACATCATCGCCCC 92819 Query 107274 GGATGCCGATGGCCACACGCATAAACATGT 107303 |||||| | || |||||||| | ||||| Sbjct 92818 AGATGCCAACTGCAACACGCATGATCATGT 92789 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589967001824040