Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Diaporthe_20aspalathi_20[genbank_20GCA_5F001447215.1_202015-11-20]
1,871 sequences; 55,029,878 total letters
Query= NC_014789.1
Length=184409
Score E
Sequences producing significant alignments: (Bits) Value
seq1209 203 4e-47
>seq1209
Length=374226
Score = 203 bits (224), Expect = 4e-47
Identities = 1127/1770 (64%), Gaps = 45/1770 (3%)
Strand=Plus/Minus
Query 105558 TGAACTGAATTGGGCGCGCCTT-TGCCTTAGATCGGAGATAGTACATCCCGGTCTTGAGT 105616
||||||| || ||| ||| || ||||| | ||||| |||||||| || ||||||||
Sbjct 94537 TGAACTGGAT-GGGTGCGGCTGCTGCCTGGGTGCGGAGGTAGTACATGCCAGTCTTGAGA 94479
Query 105617 CCTTGTTTCCACGCGTACATATGCATAGAAGAGAGCTTGGACATCGTTGGACTTTC-CAT 105675
|| | ||||| | | ||||| | || |||| ||| | ||| || || |||
Sbjct 94478 CCGAGCTTCCAGCCAGCGAAGTGCATGCTGGTGATCTTGCCCATGGATGG-CTCTCGCAT 94420
Query 105676 GAAAAGATTCATACTTTGACTCTGGTCAATGAAGCGACCACGTTGTGCCGCCATATCAAT 105735
| | || | ||| |||||| |||||| ||||| | || ||||| | |
Sbjct 94419 GTGGATGTTAAGTGACTGAGACTGGTCGATGAAGGCGCCACGGTCAGCAGCCATCTGCA- 94361
Query 105736 GACATCCTTCATCTT---GATTTCCCACACTGTGCGGTAGAGATTCTTGATATCATCTGG 105792
|| || ||| ||||||||| || || ||| || |||||||||| | ||
Sbjct 94360 --CAATTGTCCTCTGAGAGATTTCCCAGACGGTCTTGTACAGCGCCTTGATATCAGCCGG 94303
Query 105793 GATATCTGAGA-TATTTTGAATTGAACCCCCCGCCTTGACCATGAGATCCTTCATATCCT 105851
||| ||| || |||| || | ||||| || | || || | | |||||| |||
Sbjct 94302 GATG-CTGGGAATATTCTGCACGGAACCGTCCTCGGCGATGATACGGTTCTTCATGGCCT 94244
Query 105852 TGGACCAAAGACCAATCTTCTTGAGATCATTGACGAGATGCTTGTTGACAATCACAAACT 105911
||||| | |||| || | || || ||| || |||||| | | ||||
Sbjct 94243 CAGACCACAAGCCAAGCTCTGTCAGGTCCCTGAGAAGCCAAGGGTTGACGACCTGGAACT 94184
Query 105912 CTCCCGCGAGGGTTCTTCTCAGATAGATGTTCGTCGTGTAGGGTTCAAAGCATTCATTAT 105971
| || ||||| | || | | |||||||| | || || || || ||||| || || |
Sbjct 94183 CGCCAGCGAGCACACGTCGCTGGTAGATGTTGGAGGTATATGGCTCGAAGCACTCGTTGT 94124
Query 105972 TACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAA 106031
| |||| ||| || | |||||| || || ||||| ||||||||||| | ||||| ||||
Sbjct 94123 TGCCCAGGATCTGCGAGGTGGATGCAGTAGGCATGGGTGCCATCAACAAGCTGTTGCGAA 94064
Query 106032 GACCCTTTTCCTTGATGCGTTCCTTGAGAACATCCCAGTCGTA--GTTGAGCTTGGTTTC 106089
||| | |||||||| ||||||| | |||||||| | | | || || ||
Sbjct 94063 TACCAGTCTCCTTGATCTTGGCCTTGAGGGCGTCCCAGTCCCACAGGTCAGAA-GGCTTG 94005
Query 106090 ACCTTCCCACATATCAAATTGAAGCACCCCTTGGGACGTGGGAGAACCCTCAAATGTCTC 106149
|| |||| |||| || || || || | || || ||| ||| ||||| ||||||
Sbjct 94004 ACGTTCC-ACATGTCGAACTGGAGGATGCCCTGCGACACGGGGCTGCCCTCGTATGTCTT 93946
Query 106150 ATAGGAACCTTGGGCTTCAGCCAATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGT 106209
|| | |||| | | || | || | | || || | || || || |||||
Sbjct 93945 GTATGTGCCTTCCACCTTGGCAATGTCGCTGGATGCTGTGAGAGCAGCATGGTAGATGGT 93886
Query 106210 TTCAAAGATACGAGCATTCATCTCCTTGGCTTCATCTGAATCAAATG-CGTA-GCGGCAC 106267
|| ||||| | |||| ||| || || ||||| || | | || | | |
Sbjct 93885 CTCGAAGATTTGCTTGTTCAGCTCACGCGCCTCGGGGGAATCGAAGGGCATACGAAGAGC 93826
Query 106268 AAAATAAATACATCCGCGAGACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTA 106327
|| ||| |||| || ||||| ||||| || | ||||||||||| ||||||||| ||
Sbjct 93825 CAAG--AATGCATCGGCAAGACCCTGAACGCCGACACCAATAGGTCGGTGTCGCATGTTG 93768
Query 106328 GACTTTCGCGCAGTCTCAACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTG 106387
|| || || || || || || || || | ||| | || |
Sbjct 93767 CTGTTGTATGCCTCCTTCACCGGGTAGTGGTTGACATCGATAATCTTGTTCAAGTTGCGG 93708
Query 106388 GTAACAATCTTTGTGATTTCATGAAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCATTG 106447
|||| || |||| || || || | | | | | | | || | || |
Sbjct 93707 ACGACAACCTGAGTGACCTCGTGCAGCTGCTGGAAGTTGTAGCAGTTGTTGTCATAATCG 93648
Query 106448 ACATACTTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTG 106507
|| || || || || || || |||| ||||| ||||| ||||||| | | |
Sbjct 93647 ACGTATGCCGGCAGAGCAATGGAAGCCAGGTTGCAGACAGCGACCTCATCCGGGGCCGAG 93588
Query 106508 TACTCTAAAATTTCTGTACACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTA 106567
||||| | || || || || | ||| || || || || |||| ||||| |||||
Sbjct 93587 TACTCGATGATCTCGGTGCAGAGGTTAGAGCTGCGGATGGTGCCCAGGTTCTTCTGGTTG 93528
Query 106568 CTCTTTTTGTT-GCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGA 106626
||||| ||| || | ||| ||||| ||||| |||| | || ||||| ||||| |
Sbjct 93527 CTCTTCCGGTTTGCGTG-ATCTTTGTACAGCATAAAGGGGTTACCAGTCTCGGTCTGAGC 93469
Query 106627 CTTGAGAATTGCCTTCCACA-CATCGGCGGCTGGTACAATGGCGTT-GGCC-CGTCCCTC 106683
|| || || || | ||||| | || | | || || || | | |||| || |||||
Sbjct 93468 CTCAAGGATGGCATACCACAGCTTCTGGGCCTT---CAGTGTCTTACGGCCGCGGCCCTC 93412
Query 106684 CGCCTCGTACTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGG 106743
| ||||||||| ||||||||| |||||||||||||| ||||| ||| || ||
Sbjct 93411 CTGCTCGTACTTCTCGTAGAGGGCCTCAAACTCCTCACCGTAGCAGTCGGCGAGGCCCGG 93352
Query 106744 TGCCTTGTCTGGACAGAAAAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAAAG 106803
|| || || || | ||| | ||| | ||| || ||| |||||||||||||| ||
Sbjct 93351 GCACTCGTTGGGGCACATAAGGGTCCAGTCACCGTTCTTCTCGACCCGCTTCATGAACAG 93292
Query 106804 GTCTGGAATCCACAG-GGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGT 106862
|| || ||||| || | | | ||| || || | | || ||| || | ||| ||||
Sbjct 93291 ATCAGGGATCCAGAGAGCAAGGAAA-AGGTCACGAGCTCGGATCTCCTCCTTACCGTGGT 93233
Query 106863 TGAGTCGTAACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGA 106922
| || | || |||||||| | || ||| |||||||| ||||| || || | ||||
Sbjct 93232 TCTTCCGCAGGTCGAGGAACTCGAAGACATCAGCGTGCCACGGCTCGAGGTAAATAGCGA 93173
Query 106923 TAGATCCCTTTCGACGC------CCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATA 106976
| || ||||| ||| | || | ||||| || || ||| ||| || |
Sbjct 93172 AGGCACC---GGGACGCTTGTTGCCACCCTGGTCGACATAACGGGCAGTGTTGTTGAAGA 93116
Query 106977 CGCGAAGCATTGGAATAATACCATCTGATTGACCATTTGT-CCCCCGA-ATACGAGATTT 107034
| || ||||| ||| | || || | || ||| || || || ||| ||||||
Sbjct 93115 CTCGCAGCATGGGAGTGATGCCGTTGGAGGTACCGTTGGTGCCAGCGATGTACGAG--CC 93058
Query 107035 ATTGGCTCTCACATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGC 107094
|||| | | | |||| || || || || || || ||| ||| ||||| ||
Sbjct 93057 GGTGGCACGGATACGGTGGACGTTCAGGCCGATGCCTCCGGCCATCTTGGAGATCATGGC 92998
Query 107095 ACACTCCGTAAGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAA 107154
||| | | || || ||||||| || | ||| ||||||||| || ||| |||||
Sbjct 92997 ACATGTCTTGAGTGTGTCATAGATGCCCTCGATGCTGTCCTCCTTCATGTCGACGAGGAA 92938
Query 107155 GCAACTGGACATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAAT 107214
|||| |||| ||| || || || ||||||||||| || || || | || || |
Sbjct 92937 GCAAGATGACAGCTGGGGCTGGGGAGTGCCAGCATTGAATAGTGTGGGCGAGGCATGGGT 92878
Query 107215 GAACATACCT-TGGGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGT 107273
||| | || | | ||||| || ||| ||||| | ||| || | || || ||
Sbjct 92877 GAAGA-ACTTGTTTGACATGAGGTTGTAGGTCTCGATGACCCTCTCCACATCATCGCCCC 92819
Query 107274 GGATGCCGATGGCCACACGCATAAACATGT 107303
|||||| | || |||||||| | |||||
Sbjct 92818 AGATGCCAACTGCAACACGCATGATCATGT 92789
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 589967001824040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |