Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaporthe_20aspalathi_20[genbank_20GCA_5F001447215.1_202015-11-20] 1,871 sequences; 55,029,878 total letters Query= NC_015280.1 Length=181044 Score E Sequences producing significant alignments: (Bits) Value seq1832 109 6e-19 >seq1832 Length=87240 Score = 109 bits (120), Expect = 6e-19 Identities = 152/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 153777 GGTATTCCTATGGGATATGGAGGTCCTCATGCTGCATTCTTTGCAACAACAGACAAGTAT 153836 ||| |||| ||||| | || || || ||||| ||||||||||| || || ||| | Sbjct 23084 GGTGTTCCAATGGGCTTCGGTGGCCCCCATGCCGCATTCTTTGCGGTCACTGAGAAGCAC 23143 Query 153837 AAGAGAAAGATACCTGGCAGAATTGTAGGTCAGTCAGTAGATAGTGAAGGTAATAAAGCA 153896 ||||| ||||| || ||| | | | ||| ||| || || || || || Sbjct 23144 AAGAGGAAGATGCCAGGCCGTCTCATTGGTGTGTCCAAGGACAGGCTTGGCGGGAAGGCG 23203 Query 153897 TACAGATTAGCACTACAGACTAGAGAGCAGCATATCAGGAGAGACAAAGCAACCAGTAAC 153956 |||||| || || |||||| | |||||||||||| |||||||||| || || || ||| Sbjct 23204 CTCAGATTGGCCCTGCAGACTCGTGAGCAGCATATCCGGAGAGACAAGGCGACTAGCAAC 23263 Query 153957 ATCTGCACAGCTCAGGCACTGCTGGCTAATATG 153989 ||||||| || ||||||||||| || || ||| Sbjct 23264 GTCTGCACTGCACAGGCACTGCTCGCAAACATG 23296 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 579199253660640