Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaporthe_20aspalathi_20[genbank_20GCA_5F001447215.1_202015-11-20] 1,871 sequences; 55,029,878 total letters Query= NC_018504.1 Length=123876 Score E Sequences producing significant alignments: (Bits) Value seq1489 107 2e-18 >seq1489 Length=43664 Score = 107 bits (118), Expect = 2e-18 Identities = 149/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 101267 TGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGC 101326 || ||||| ||||| || || || ||||| |||| || || | | | || || | |||| Sbjct 22866 TGGAGGGTTGATTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCAAGTTGC 22807 Query 101327 TTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTT 101386 || || || || |||| ||||| ||||| || || ||||| || || || ||||| || Sbjct 22806 TTGCCGGCGAAGATCAGGCGCTGCTGATCAGGGGGGATGCCCTCCTTGTCCTGAATCTTG 22747 Query 101387 TGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTT 101446 ||||| | || | ||| ||||| | || || || || |||| || |||||||| Sbjct 22746 GACTTTACGTTGTCGATAGTATCAGAGGACTCGACCTCGAGGGTGATGGTCTTGCCGGTG 22687 Query 101447 AAAGTTTTTACAAATATCTGCATGGTTAC 101475 | || || || || ||||||||||| || Sbjct 22686 AGGGTCTTGACGAAGATCTGCATGGTGAC 22658 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396269363737947