Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaporthe_20aspalathi_20[genbank_20GCA_5F001447215.1_202015-11-20] 1,871 sequences; 55,029,878 total letters Query= NC_018875.1 Length=119082 Score E Sequences producing significant alignments: (Bits) Value seq1489 113 3e-20 >seq1489 Length=43664 Score = 113 bits (124), Expect = 3e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGAT 48599 ||||| | || |||| |||||| || ||||| ||| || || || ||||| ||||| Sbjct 23346 CCGCCACGGAGACGCAGCACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCAGAG 23287 Query 48600 AGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGA 48659 || | || |||| |||| ||| || || || || || || ||||| || || | || Sbjct 23286 AGGGTCCGGCCGTCTTCCAGCTGTTTGCCAGCGAAAATGAGACGCTGCTGGTCTGGTGGG 23227 Query 48660 ACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACC 48719 | |||||||||||| ||||||| || || | | | || |||| ||||||| Sbjct 23226 ATGCCCTCCTTGTCCTGAATCTTTGACTTGACGTTGTCAATCGTGTCCGACGACTCCACC 23167 Query 48720 TCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || | ||| ||||| || ||||||| || || ||||| |||||||| Sbjct 23166 TCGAGCGTGATCGTCTTCCCCGTCAGGGTCTTGACAAAGATCTGCAT 23120 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 380928913551333