Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaporthe_20aspalathi_20[genbank_20GCA_5F001447215.1_202015-11-20] 1,871 sequences; 55,029,878 total letters Query= NC_019406.1 Length=279967 Score E Sequences producing significant alignments: (Bits) Value seq1840 100 5e-16 >seq1840 Length=236186 Score = 100 bits (110), Expect = 5e-16 Identities = 104/134 (78%), Gaps = 2/134 (1%) Strand=Plus/Plus Query 181914 GGCATCACGACT-TCGGGCTTGCTGAACGCCATCGACGGGATCGCCTCGGCCGAGGGCCG 181972 ||||||| | || |||||| | ||||||||||||||||| |||| ||| ||||||||| Sbjct 86110 GGCATCA-GCCTGTCGGGCCTCCTGAACGCCATCGACGGCGTCGCGTCGCACGAGGGCCG 86168 Query 181973 AGTGCTCTTCATCACCTCGAACCGGCCGGATGTGCTGGATTCTGCCCTCATCCGTCCTGG 182032 |||||| |||| ||| | ||| ||| || | ||| || ||||| ||||| || || Sbjct 86169 CGTGCTCATCATGACCACCAACAAGCCCGAGGCGCTCGACGACGCCCTGATCCGGCCGGG 86228 Query 182033 CCGCATCGACGTGC 182046 |||| ||||| ||| Sbjct 86229 CCGCGTCGACTTGC 86242 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 895745450263320