Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaporthe_20aspalathi_20[genbank_20GCA_5F001447215.1_202015-11-20] 1,871 sequences; 55,029,878 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq1489 91.5 1e-12 >seq1489 Length=43664 Score = 91.5 bits (100), Expect = 1e-12 Identities = 151/218 (69%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 480552 CGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGTT 480611 || || |||||||| || || || ||| || || || || || || | ||||| Sbjct 23112 CGGAGGCGGAGTACGAGGTGCAGAGTAGACTCCTTCTGAATGTTGTAGTCGGACAGAGTC 23053 Query 480612 CTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCT 480671 | | ||| || || |||||||||||||| || || || || || ||||| || || || Sbjct 23052 CGGCCATCCTCGAGCTGCTTTCCAGCAAAGATGAGGCGCTGCTGGTCAGGGGGGATGCCC 22993 Query 480672 TCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAGG 480731 |||||||| |||||||| || || || |||||||||| | || ||| Sbjct 22992 TCCTTGTCCTGAATCTTGGACTTTACGTTGTCGATAGTATCAGAGGACTCGACCTCGAGG 22933 Query 480732 GTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 || || || || |||||||| ||||| ||||| || || Sbjct 22932 GTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATCTG 22895 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3268098943731908