Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaporthe_20aspalathi_20[genbank_20GCA_5F001447215.1_202015-11-20] 1,871 sequences; 55,029,878 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq1832 114 1e-20 >seq1832 Length=87240 Score = 114 bits (126), Expect = 1e-20 Identities = 153/213 (72%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 139298 CATATTTGCGAGCAGTGCTTGTGCTGTGCAGATGTTACTGGTTGCTTTGTCTCTTCTAAT 139357 ||| |||||||||||||| ||||| ||||||| ||| || || || |||||||| | || Sbjct 23296 CATGTTTGCGAGCAGTGCCTGTGCAGTGCAGACGTTGCTAGTCGCCTTGTCTCTCCGGAT 23237 Query 139358 ATGCTGCTCTCTAGTTTGTAGTGCTAATCTGTATGCAGGATTGCCTTCGCTGTCCACTGA 139417 ||||||||| | ||| || || || |||||| || ||| |||||| || Sbjct 23236 ATGCTGCTCACGAGTCTGCAGGGCCAATCTGAGCGCCTTCCCGCCAAGCCTGTCCTTGGA 23177 Query 139418 CTGACCTACAATTCTGCCAGGTATCTTTCTCTTATACTTGTCTGTTGTTGCAAAGAATGC 139477 | ||| | | | ||| || ||||| ||||| | ||| || || ||||||||||| Sbjct 23176 CACACCAATGAGACGGCCTGGCATCTTCCTCTTGTGCTTCTCAGTGACCGCAAAGAATGC 23117 Query 139478 AGCATGAGGACCTCCGTATCCCATAGGAATACC 139510 ||||| || || ||| | ||||| |||| ||| Sbjct 23116 GGCATGGGGGCCACCGAAGCCCATTGGAACACC 23084 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578984858674920