Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaporthe_20aspalathi_20[genbank_20GCA_5F001447215.1_202015-11-20] 1,871 sequences; 55,029,878 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq1209 226 3e-54 >seq1209 Length=374226 Score = 226 bits (250), Expect = 3e-54 Identities = 1132/1775 (64%), Gaps = 41/1775 (2%) Strand=Plus/Plus Query 75212 CCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGTC 75271 |||||| ||||| ||||||| || ||| | |||||| || || || | || ||| Sbjct 92782 CCACAGCACATGATCATGCGTGTTGCAGTTGGCATCTGGGGCGATGATGTGGAGAGGGTC 92841 Query 75272 TTGGAGACATACGACAAGATGTCCCA-AGGTATGTTCATTCACGCAACACCAACCCTCTT 75330 | ||||| ||| || ||||| | | || | |||| || || | || || || || Sbjct 92842 ATCGAGACCTACAACCTCATGTCAAACAAGT-TCTTCACCCATGCCTCGCCCACACTATT 92900 Query 75331 CAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGA 75390 ||||||||| || || || ||| |||| ||||||||| ||| || |||||||| Sbjct 92901 CAATGCTGGCACTCCCCAGCCCCAGCTGTCATCTTGCTTCCTCGTCGACATGAAGGAGGA 92960 Query 75391 CTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGG 75450 | ||| | || ||||||| || || | | ||||| ||||| ||| ||| || Sbjct 92961 CAGCATCGAGGGCATCTATGACACACTCAAGACATGTGCCATGATCTCCAAGATGGCCGG 93020 Query 75451 GGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTA-TTCG-GGGGACA 75508 || || || || || |||| | | | |||| |||||| ||| || || Sbjct 93021 AGGCATCGGCCTGAACGTCCACCGTATCCGTGCCA--CCGGCTCGTACATCGCTGGCACC 93078 Query 75509 AATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTAT 75568 || ||| || | || || | ||| ||||| || || || ||| ||| || || ||| Sbjct 93079 AACGGTACCTCCAACGGCATCACTCCCATGCTGCGAGTCTTCAACAACACTGCCCGTTAT 93138 Query 75569 GTAAATCAAGCGGG------GCGTCGCAAGGGGTCCATCGCGGTCTACTTGGAACCATGG 75622 || | || | || ||||| | || || |||| | ||| | || || ||| Sbjct 93139 GTCGACCAGGGTGGCAACAAGCGTCCC---GGTGCCTTCGCTATTTACCTCGAGCCGTGG 93195 Query 75623 CATGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCTCGG 75682 || || ||| || | |||||||| || | || ||||| ||| | || ||| || Sbjct 93196 CACGCTGATGTCTTCGAGTTCCTCGACCTGCGGAAGAACCACGGTAAGGAGGAGATCCGA 93255 Query 75683 TGTAGAGATCTCTTTTCAT-CCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGA 75741 | | || || ||| | | | || ||||| || || || |||||||||||||| ||| | Sbjct 93256 GCTCGTGACCT-TTTCCTTGCTCTCTGGATCCCTGATCTGTTCATGAAGCGGGTCGAGAA 93314 Query 75742 GGGTGGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCGGTGGG 75801 | ||| | ||| | ||| | || || || || || || ||| ||||| || Sbjct 93315 GAACGGTGACTGGACCCTTATGTGCCCCAACGAGTGCCCGGGCCTCGCCGACTGCTACGG 93374 Query 75802 TGAGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTAGAGCCAATGCGACTGT 75861 |||||||||||| ||||||||| ||||| || ||||||| | | | | ||| | Sbjct 93375 TGAGGAGTTTGAGGCCCTCTACGAGAAGTACGAGCAGGAGGGCCGCGGCCGTAAGACACT 93434 Query 75862 ACCAGCCGCCGATG-TTTGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCAT 75920 || | | || | | ||| | || || || | | ||||| |||||||| | || | Sbjct 93435 -GAAGGCCCAGAAGCTGTGGTATGCCATCCTTGAGGCTCAGACCGAGACTGGTAACCCCT 93493 Query 75921 ATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCA 75980 |||||| ||||| ||| ||| |||||| ||||| ||||| |||| || ||| Sbjct 93494 TTATGCTGTACAAAGATCACGCAAACCGGAAGAGCAACCAGAAGAACCTGGGCACCATCC 93553 Query 75981 AGAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGTTT 76040 ||||| || || ||||| || || | |||||| | | ||||||| ||||| | Sbjct 93554 GCAGCTCTAACCTCTGCACCGAGATCATCGAGTACTCGGCCCCGGATGAGGTCGCTGTCT 93613 Query 76041 GCAATTTGGCATCAATCGCCCTTCCAAAGTATGTCAATGAAGAGACTCGCACTTTTGATT 76100 |||| |||| || || || || || || ||| || | || | | | | | Sbjct 93614 GCAACCTGGCTTCCATTGCTCTGCCGGCATACGTCGATTATGACAACAACTGCTACAACT 93673 Query 76101 ATGAAAAACTTCATGAAATCACAAAGATTGTTACCAAAAATCTAAACCGAGTCATTGACA 76160 | | || || || |||| || |||| | || | ||| | || || Sbjct 93674 TCCAGCAGCTGCACGAGGTCACTCAGGTTGTCGTCCGCAACTTGAACAAGATTATCGATG 93733 Query 76161 GAAATTTTTATCCCGTTGAGACTGCGCGAAAGTCTAATATGCGACACAGACCTATTGGTT 76220 || || || || || || || || ||||||||| ||||||||||| Sbjct 93734 TCAACCACTACCCGGTGAAGGAGGCATACAACAGCAACATGCGACACCGACCTATTGGTG 93793 Query 76221 TGGGTGTTCAAGGTCTCGCGGATGTATTTATTTTGTGCCGC-TACG-CATTTGATTCAGA 76278 | || ||||| ||||| || |||| ||| || | | | || | | || ||||| Sbjct 93794 TCGGCGTTCAGGGTCTTGCCGATGCATT--CTTGGCTCTTCGTATGCCCTTCGATTCCCC 93851 Query 76279 TGAAGCCAAGGAGATGAATGCTCGTATCTTTGAAACCATGTATCACGCATCCCTGGAGGC 76338 || || ||| |||| | ||||| || ||||| || || || | || || Sbjct 93852 CGAGGCGCGTGAGCTGAACAAGCAAATCTTCGAGACCATCTACCATGCTGCTCTCACAGC 93911 Query 76339 GAGTTGTGAATTGGCTGAAGCCCAAGGTTCCTATGAGACATTTGAGGGTTCTCCCGCGTC 76398 | || | || | | |||| | || |||||| ||||| |||| ||| Sbjct 93912 ATCCAGCGACATTGCCAAGGTGGAAGGCACATACAAGACATACGAGGGCAGCCCCGTGTC 93971 Query 76399 CCAAGGGGTGCTTCAGTTTGATATGTGGGAAGGTGAAACCAAGCTCAAC--TACGACTGG 76456 || || | || ||||| || |||| |||| || || || || | | | |||||| Sbjct 93972 GCAGGGCATCCTCCAGTTCGACATGT-GGAACGTCAAGCC-TTCTGACCTGTGGGACTGG 94029 Query 76457 GATGTTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATGGCACCA 76516 || | ||||||| |||||||||| ||| |||| ||||| | ||||||||||| Sbjct 94030 GACGCCCTCAAGGCCAAGATCAAGGAGACTGGTATTCGCAACAGCTTGTTGATGGCACCC 94089 Query 76517 ATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCATACACA 76576 ||||| || || |||||| | || ||| |||| || || || ||||| || ||||| || Sbjct 94090 ATGCCTACTGCATCCACCTCGCAGATCCTGGGCAACAACGAGTGCTTCGAGCCATATACC 94149 Query 76577 ACAAACATCTACCTGAGAAGAACCCTCGCAGGTGAGTTTGTCATTGTCAACAAGCACCTC 76636 | |||||||||| | || | ||||| || ||||| | |||||| || Sbjct 94150 TCCAACATCTACCAGCGACGTGTGCTCGCTGGCGAGTTCCAGGTCGTCAACCCTTGGCTT 94209 Query 76637 GTCAATGACCTCAAGAAGATTGGTCTCTGGTCCAAGGATATGAAGGATCTCATGGTGAAA 76696 ||| ||||| | || |||| | ||||| ||| |||||| | | || | Sbjct 94210 CTCAGGGACCTGACAGAGCTTGGCTTGTGGTCTGAGGCCATGAAGAACCGTATCATCGCC 94269 Query 76697 GCGGGTGGTTCCATTCAAAATA-TCTCAGATATCCCAGATGATATCAAGAATCTCTACCG 76755 | || |||||| | || |||| || ||| ||||| | |||||||||| || ||| Sbjct 94270 GAGGACGGTTCCGTGCAGAATATTCCCAG-CATCCCGGCTGATATCAAGGCGCTGTACAA 94328 Query 76756 CACAGTGTGGGAAATC---AAGATGAAAGATGTCATTGACATGGCCGCAGATCGTGGTCG 76812 || || ||||||||| ||| || | || | | ||||| || || ||||| Sbjct 94329 GACCGTCTGGGAAATCTCTCAGAGGACAATTG---TGCAGATGGCTGCTGACCGTGGCGC 94385 Query 76813 CTTCATTGATCAAAGTCAAAGT--ATGAATCTATTCATG-GAAAGTCCAACGATGTCCAA 76869 |||||| || | |||| ||| | || | |||| || || ||| | ||| ||| Sbjct 94386 CTTCATCGACC--AGTCTCAGTCACTTAACATCCACATGCGAGAG-CCATCCATGGGCAA 94442 Query 76870 GCTCTCTTCTATGCATATGTACGCGTGGAAACAGGGGCTCAAAACCGGAATGTACTATCT 76929 | || | ||||| | | ||||| | || ||||| || || |||||||| || Sbjct 94443 GATCACCAGCATGCACTTCGCTGGCTGGAAGCTCGGTCTCAAGACTGGCATGTACTACCT 94502 Query 76930 CCGATCAAAGGCGAAAGCCCGACCAATTCAGTTCA 76964 ||| | |||| |||| ||| || ||||||| Sbjct 94503 CCGCACCCAGGCAGCAGCCGCACCCATCCAGTTCA 94537 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596555647728480