Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaporthe_20aspalathi_20[genbank_20GCA_5F001447215.1_202015-11-20] 1,871 sequences; 55,029,878 total letters Query= NC_020864.1 Length=205622 Score E Sequences producing significant alignments: (Bits) Value seq576 435 4e-117 seq1489 183 4e-41 seq28 149 8e-31 seq461 113 6e-20 seq1718 107 3e-18 seq697 86.0 8e-12 >seq576 Length=224932 Score = 435 bits (482), Expect = 4e-117 Identities = 1010/1516 (67%), Gaps = 10/1516 (1%) Strand=Plus/Minus Query 195367 TATCCCGAATGACCAAGGAAACCGTACAACTCCATCGTACGTTGCCTTTACAGATAATGA 195426 |||| | || ||||| |||||||| || || || || | ||| || || || || | ||| Sbjct 101429 TATCGCAAACGACCAGGGAAACCGGACCACACCTTCCTTCGTCGCTTTCACCGACACTGA 101370 Query 195427 ACGTCTCGTTGGAGATGCCGCAAAAAATCAGACAGCTATGAACCCTATCAATACTGTCTT 195486 ||||| | ||||||||||| || || ||| || |||||||| ||| || ||||| Sbjct 101369 GCGTCTGATCGGAGATGCCGCCAAGAACCAGGTCGCCATGAACCCCCACAACACCGTCTT 101310 Query 195487 TGACGCGAAGCGTCTTATTGGTCGCAAGTTTTCGGATAAGAAAGTCCAAGACGATATAAA 195546 || || ||||| | ||||| |||||||| ||| | || || | ||| || || Sbjct 101309 CGATGCAAAGCGGTTGATTGGCCGCAAGTTCCAGGACCCTGAGGTTCAGGCCGACATGAA 101250 Query 195547 GGACTGGTCTTATGAAGTTGTTCCCGGTGTGGCTGATAAGCCTATGATTAATGTTGAATT 195606 | ||| | | | ||| | | || || || |||||| | || | || || || Sbjct 101249 GCACTTCCCCT-TCAAGATCGT--CGAGAAGGGTGGTAAGCCCAACATCGAGGTCGAGTT 101193 Query 195607 TCACGGTGAGAAGAAACAATTTGCTCCCGAAGAAATTTCGTCTATGGTGTTGATTAAGAT 195666 | ||||||| || || | |||||||| || || || ||||| | | ||||| Sbjct 101192 CAAGGGTGAGACCAAGACCTTCACCCCCGAAGAGATCTCCTCCATGGTCCTCACCAAGAT 101133 Query 195667 GAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAGTTGTGACTGTACC 195726 | ||||| || || ||| | | ||| || || || | || || | || || || Sbjct 101132 GCGTGAGACCGCTGAGGCTTACCTCGGTGGCACCGTCAACAACGCTGTCATCACCGTCCC 101073 Query 195727 TGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATTGCGGGTCT 195786 || ||||||| || || || || ||||| || |||||||||| | ||||| || || Sbjct 101072 CGCCTACTTCAACGACTCTCAGCGTCAGGCCACCAAGGACGCTGGTCTCATTGCTGGCCT 101013 Query 195787 AAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGTCTGGACAA 195846 ||| ||| | || ||||| || || || || || || ||||| || ||||| ||||| Sbjct 101012 GAACGTTCTGCGTATCATCAACGAGCCCACCGCTGCCGCCATTGCCTACGGTCTTGACAA 100953 Query 195847 GAACAAGGACGAAGATAAAAATGTATTGATCTTTGATCTCGGTGGTGGTACGTTTGATGT 195906 ||| || | || || || ||||||| ||||| || |||||||| || ||||| Sbjct 100952 GAAGGTCGAGGGCGAGCGCAACGTCCTGATCTTCGATCTGGGCGGTGGTACTTTCGATGT 100893 Query 195907 CTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCTGGTGATACTCA 195966 ||| || || | || || | ||||| ||||| || ||| ||||||| || |||||||| Sbjct 100892 CTCGCTCCTGACCATCGAGGAGGGTATCTTCGAGGTCAAGTCTACTGCCGGAGATACTCA 100833 Query 195967 TCTAGGTGGTGAAGATTTCGATGCACGTCTTCTCCGTCATTTGTCTGATGAGTTCCGTCG 196026 || |||||||| || || || ||||| || || || | |||||| || Sbjct 100832 CCTGGGTGGTGAGGACTTTGACAACCGTCTCGTCAACCACTTCGTAAACGAGTTCAAGCG 100773 Query 196027 AAAGAATAAGAAAGATATTTCTGGA--AATCCTAGGGCTCTTCGTCGGCTTAGGACTGCA 196084 ||| | ||||| | | || | | || || | || || ||||| || | ||||| Sbjct 100772 CAAGCACAAGAAGG--ACCTCAGCACCAACGCTCGTGCCCTGCGTCGTCTCCGCACTGCT 100715 Query 196085 TGTGAACGTGCCAAACGAACTCTCTCTTCTACGGCTCAAACAATGGTTGAGATTGATTCG 196144 || || |||||||| |||||||| ||||| | || || || | ||||| || || Sbjct 100714 TGCGAGCGTGCCAAGCGAACTCTGTCTTCCTCTGCACAGACCTCCATCGAGATCGACTCC 100655 Query 196145 TTGTTTGACGGAATTGACTTCTATACAACTATTACCCGTGCACGTTTTGAAGAGTTAAAC 196204 | | || || || |||||||| || | || |||||||| ||||| || ||| | | Sbjct 100654 CTCTACGAGGGTATCGACTTCTACACCTCCATCACCCGTGCTCGTTTCGAGGAGCTGTGC 100595 Query 196205 TCTGATTTGTTTAGGAAGTGTATGGAACCTGTTGAACAAGTACTTCGTGACGCAAAGATG 196264 || |||| | || | || || || | || || ||||| ||||| Sbjct 100594 CAGGACCTGTTCCGCTCCACCCTGCAGCCCGTCGACCGTGTCCTGACCGACGCCAAGATC 100535 Query 196265 GATAAGTCTAAGGTTGATGAAATTGTCCTTGTGGGAGGATCAACCCGTATTCCGAAGATT 196324 || ||||| ||||| | || || ||||| || || || || |||||||| || || Sbjct 100534 GACAAGTCCCAGGTTCACGAGATCGTCCTCGTCGGCGGTTCCACCCGTATCCCCCGTATC 100475 Query 196325 CAACAGATGCTTTCTAGCTTCTTCAATAATAAAGATTTAAACAAAACGATCAACCCGGAT 196384 || || | | | || |||||| || || ||||| | |||||||| || Sbjct 100474 CAGAAGCTCATCACCGACTACTTCAACGGAAAGGAGCCCAACAAGTCCATCAACCCCGAC 100415 Query 196385 GAAGCAGTTGCTTATGGTGCGGCCGTTCAGGCTGCTATTCTCTCAGGTGTTGACAATAAT 196444 || || || || |||||||| ||||| ||||| || ||||| || |||| || Sbjct 100414 GAGGCTGTGGCCTATGGTGCAGCCGTGCAGGCCGCAATTCTGTCTGGTGACACCAGCTCC 100355 Query 196445 AA--CGTCCAA-GATCTTCTGCTACTTGATGTTGCACCCGTATCCCTGGGTCTTGAAACA 196501 || || |||| || | ||||| || ||||| || || | ||| | ||| |||| || Sbjct 100354 AAGTCGACCAATGAGATCCTGCTGCTCGATGTCGCGCCGCTGTCCATCGGTATTGAGACC 100295 Query 196502 GCGGGTGGTGTTATGACTAAAATTATTGATAGGAACACAACTATTCCGACTAAGAAGGAA 196561 || |||||| | ||||| || | || ||||||| || || || || |||||| Sbjct 100294 GCTGGTGGTATGATGACCAAGCTCATCCCCCGGAACACCACCATCCCCACCAAGAAGTCC 100235 Query 196562 CAAGTCTTTTCAACGTATTCCGATAATCAACCAGGTGTTCATATTCAAGTATATGAAGGA 196621 | ||||| || || | ||||| || || || ||||| | || || || || || || Sbjct 100234 GAGGTCTTCTCCACCTTCTCCGACAACCAGCCTGGTGTGCTCATCCAGGTCTACGAGGGT 100175 Query 196622 GAACGCTCCCGTGCAAAGGATAACCATCTACTTGGAACTTTCGATTTGACGGGGATTCCA 196681 || || || | ||||| ||| | || || || | ||||| |||| || || || Sbjct 100174 GAGCGTCAGCGCACCAAGGACAACAACCTGCTCGGCAAGTTCGAGCTGACCGGCATCCCC 100115 Query 196682 GCTGCACCCAGAGGTGTTCCACAGATTAATGTTTGCTTCGATATAGACGCAAATGGAATT 196741 |||| || | |||||||| |||||| | || ||||||| | ||||| || || || Sbjct 100114 CCTGCGCCTCGTGGTGTTCCTCAGATTGAGGTCACCTTCGATGTCGACGCCAACGGTATC 100055 Query 196742 CTAAACGTCACAGCTGAGGACAAGGCTTCTGGCAAATCTGAAAAGATTGTGATTACCAAT 196801 | ||||| | || || |||| | || || | | |||||||| |||||||| Sbjct 100054 ATCAACGTGTCGGCGCTCGAGAAGGGCACCGGAAAGACCAACAAGATTGTCATTACCAAC 99995 Query 196802 GACAAGGGGCGGCTTTCTAAGGAGGAAATTGAACGTATGGTTCAAGATGCGGAAAAGTAC 196861 |||||||| || || || |||||||| || || || ||| || || || || |||| | Sbjct 99994 GACAAGGGCCGTCTCTCCAAGGAGGACATCGAGCGCATGCTTGCTGAGGCTGAGAAGTTC 99935 Query 196862 AGGGAAGAAGACGAGG 196877 | ||| || || |||| Sbjct 99934 AAGGACGAGGATGAGG 99919 >seq1489 Length=43664 Score = 183 bits (202), Expect = 4e-41 Identities = 178/229 (78%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 171860 GTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGT 171919 ||||||| ||||| || || ||||| || || || || |||||||||||||| ||||| | Sbjct 22890 GTATGCAGATCTTCGTCAAGACCCTCACCGGCAAGACCATCACCCTCGAGGTCGAGTCCT 22949 Query 171920 CAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATC 171979 | || || ||||| ||| | || |||||||||| || ||||| ||||| || || || | Sbjct 22950 CTGATACTATCGACAACGTAAAGTCCAAGATTCAGGACAAGGAGGGCATCCCCCCTGACC 23009 Query 171980 AGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACA 172039 |||| || || || |||||||| || ||||| || ||||| || || || | || |||| Sbjct 23010 AGCAGCGCCTCATCTTTGCTGGAAAGCAGCTCGAGGATGGCCGGACTCTGTCCGACTACA 23069 Query 172040 ACGTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGG 172088 || |||| |||||||||||||| ||||| || || | || || ||||| Sbjct 23070 ACATTCAGAAGGAGTCTACTCTGCACCTCGTACTCCGCCTCCGCGGTGG 23118 Score = 159 bits (176), Expect = 5e-34 Identities = 172/228 (75%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| ||||| || || ||||| || || || || |||||||||||||| ||||| || Sbjct 22664 ATGCAGATCTTCGTCAAGACCCTCACCGGCAAGACCATCACCCTCGAGGTCGAGTCCTCT 22723 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 || || ||||| ||| | || |||||||||| || ||||| ||||| || || |||||| Sbjct 22724 GATACTATCGACAACGTAAAGTCCAAGATTCAGGACAAGGAGGGCATCCCCCCTGATCAG 22783 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 || || || || || || || || || ||||| || || || |||||| | || |||||| Sbjct 22784 CAGCGCCTGATCTTCGCCGGCAAGCAACTTGAGGACGGCCGCACCCTCTCCGACTACAAC 22843 Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGT 172089 | || ||||| || || || ||||| || || | || || || ||| Sbjct 22844 ATCCAGAAGGAATCAACCCTCCACCTCGTCCTTCGTCTCCGTGGCGGT 22891 >seq28 Length=192849 Score = 149 bits (164), Expect = 8e-31 Identities = 142/182 (78%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 171870 CTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCAGACACAAT 171929 ||| ||||| ||||| || || || || |||||||||||||| ||||| || ||||| || Sbjct 42386 CTTCGTGAAGACCCTGACGGGCAAGACCATCACCCTCGAGGTGGAGTCCTCTGACACCAT 42445 Query 171930 CGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAGCAACGACT 171989 ||| ||| |||| | ||||| || || ||||| ||||| || || || ||||| ||||| Sbjct 42446 CGACAACGTCAAGTCGAAGATCCAGGACAAGGAGGGCATCCCCCCTGACCAGCAGCGACT 42505 Query 171990 TATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAACGTTCAAAA 172049 || || || || || |||||||| ||||| || |||||| | || |||||| | || || Sbjct 42506 GATCTTCGCCGGCAAGCAGCTTGAGGATGGCCGCACCCTCTCCGACTACAACATCCAGAA 42565 Query 172050 GG 172051 || Sbjct 42566 GG 42567 >seq461 Length=169429 Score = 113 bits (124), Expect = 6e-20 Identities = 331/506 (65%), Gaps = 8/506 (2%) Strand=Plus/Minus Query 196373 ATCAACCCGGATGAAGCAGTTGCTTATGGTGCGGCCGTTCAGGCTGCTATTCTCTCAGGT 196432 |||||||| ||||| || || || | |||||| ||||| ||||| | |||| || ||| Sbjct 153002 ATCAACCCCGATGAGGCTGTGGCGTTTGGTGCTGCCGTCCAGGCCGGCGTTCTTTCCGGT 152943 Query 196433 GTTGACAATAATAACGTCCAAGATCTTCTGCTACTTGATGTTGCACCCG-TATCCCTGGG 196491 | || ||| ||| |||| | | || | || || ||||| | |||| || Sbjct 152942 GAGGAGGG----AACCTCCGAGAT--TGTTCTCATGGACGTCA-ACCCGCTCACCCTCGG 152890 Query 196492 TCTTGAAACAGCGGGTGGTGTTATGACTAAAATTATTGATAGGAACACAACTATTCCGAC 196551 | | || || | || ||||| ||||| || | ||| | ||||| | || || || Sbjct 152889 TATCGAGACTACTGGAGGTGTCATGACCAAGCTGATTCCCCGCAACACTCCCATCCCCAC 152830 Query 196552 TAAGAAGGAACAAGTCTTTTCAACGTATTCCGATAATCAACCAGGTGTTCATATTCAAGT 196611 | ||| || |||| || ||| | |||| || || || | ||| | || || || Sbjct 152829 TCGCAAGAGCCAGATCTTCTCCACGGCTGCCGACAACCAGCCCGTTGTCCTGATCCAGGT 152770 Query 196612 ATATGAAGGAGAACGCTCCCGTGCAAAGGATAACCATCTACTTGGAACTTTCGATTTGAC 196671 | ||| || || || ||| | ||||| ||| | || || || | ||||| ||||| Sbjct 152769 CTTTGAGGGCGAGCGATCCATGACCAAGGACAACAACCTCCTCGGCAAGTTCGAGTTGAC 152710 Query 196672 GGGGATTCCAGCTGCACCCAGAGGTGTTCCACAGATTAATGTTTGCTTCGATATAGACGC 196731 ||||| || | || ||| | || || ||||| | || | || || | ||||| Sbjct 152709 TGGGATCCCCCCAGCTCCCCGTGGCCAACCCCAGATCGAGGTCTCTTTTGAGCTCGACGC 152650 Query 196732 AAATGGAATTCTAAACGTCACAGCTGAGGACAAGGCTTCTGGCAAATCTGAAAAGATTGT 196791 || |||||||| || || | || | ||||||| ||||||| || || Sbjct 152649 GAACGGAATTCTGAAGGTTTCGGCCGTTGACAAGGGAACTGGCAAGGGCGAGTCCATCAC 152590 Query 196792 GATTACCAATGACAAGGGGCGGCTTTCTAAGGAGGAAATTGAACGTATGGTTCAAGATGC 196851 || ||||| |||||||| || ||| | ||||||||||||| || ||||| || || Sbjct 152589 CATCACCAACGACAAGGGCCGCCTTACCCAGGAGGAAATTGAGCGCATGGTAGCCGAGGC 152530 Query 196852 GGAAAAGTACAGGGAAGAAGACGAGG 196877 || |||||| || || ||| ||| Sbjct 152529 CGAGAAGTACGCCGAGGAGGACAAGG 152504 >seq1718 Length=289554 Score = 107 bits (118), Expect = 3e-18 Identities = 263/389 (68%), Gaps = 25/389 (6%) Strand=Plus/Minus Query 198477 GCTAAGGATGAGCTCGAGGAGATTGTTGATTTTCTTAAAAACCCCGAAAAGTACTATGGA 198536 || ||||| |||||| |||||||||| || || || || |||||||| |||| || || Sbjct 243401 GCCAAGGAGGAGCTCCAGGAGATTGTCGAGTTCCTCAAGAACCCCGACAAGTTCTC--GA 243344 Query 198537 AGT--GGTGCCCGAATCCCACGTGGTGCTCTTCTCGCCGGTGCCCCGGGTACTGGTAAAA 198594 | |||| | | ||| || | ||||| | ||| | || ||||| || |||| Sbjct 243343 CCTTGGGTGGCAAGCTGCCAAAAGGAGTCCTTCTGGTTGGTCCGCCTGGTACCGGAAAAA 243284 Query 198595 CCCTTCTAGCTCGTGCTATCGCGGGTGAATCGAGTGTCCCCTTTCTTC--AGTGCTCCGC 198652 |||| || || || || ||||||||||| | | || |||||||||| || || Sbjct 243283 CCCTCCTGGCACGGGCCGTCGCGGGTGAAGCTGGCGT-CCCTTTCTTCTACATGTCTGGC 243225 Query 198653 GGCGAGTTTCATCGAGATGTTCGTTGGTGTTGGTGCTAAGCGCGTCCGGGAACTCTTTGA 198712 ||||| ||| ||| | | ||| ||||| || |||||||| ||||| || ||||| | Sbjct 243224 AGCGAG-TTCGACGAAGTCTACGTCGGTGTCGGCGCTAAGCGGGTCCGTGACCTCTTCAA 243166 Query 198713 ----GCAAGCACGTGAAAATCAACCATGTATCATCTTCATTGATGAGATTGACGCTGTTG 198768 || || || || || || |||||||||||||| ||| | |||||| ||| Sbjct 243165 CGCTGCGAGGGCG---AAGTC-CCCGGCAATCATCTTCATTGACGAGCTCGACGCTATTG 243110 Query 198769 GTAAGAAGCGTGGTGGAACTACTACACCTGGTAATGATGAGCGTGAGCAGACGATTAACC 198828 | || | ||||| || | | ||| ||| | ||||||| | |||| Sbjct 243109 GCGGCAA-----GAGGAAC-ACAAGAGACAGTACCTATGTG---AAGCAGACCCTCAACC 243059 Query 198829 AGCTTCTCACTGAGATGGATGGTTTTGAC 198857 |||| ||||| ||| |||| || |||||| Sbjct 243058 AGCTCCTCACCGAGCTGGACGGCTTTGAC 243030 >seq697 Length=20888 Score = 86.0 bits (94), Expect = 8e-12 Identities = 152/221 (69%), Gaps = 3/221 (1%) Strand=Plus/Minus Query 195719 ACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATT 195778 || || ||||| ||||||| || || || ||||| || |||||||| | | | || Sbjct 3545 ACCGTCCCTGCCTACTTCAACGACAACCAGCGCCAGGCCACCAAGGACGCCGGTTCAATC 3486 Query 195779 GCGGGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGT 195838 | ||||| ||| || | || ||||| || || || || || || || ||||| ||| Sbjct 3485 TCCGGTCTCAACGTCCTGCGTATCATCAACGAGCCCACCGCTGCCGCCATCGCTTACGGT 3426 Query 195839 CTGGACAAGAACAAGG---ACGAAGATAAAAATGTATTGATCTTTGATCTCGGTGGTGGT 195895 || | | |||||| || | || || || | |||| ||||| ||||||||| Sbjct 3425 CTTGGCTCCAACAAGTCCAACAAGGAGCGCAACGTTCTCATCTACGATCTTGGTGGTGGT 3366 Query 195896 ACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATT 195936 || || ||||| || || || || ||| |||| ||| |||| Sbjct 3365 ACTTTCGATGTTTCCCTCCTTAACATTCAAGGAGGTGTATT 3325 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 657847014243120