Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaporthe_20aspalathi_20[genbank_20GCA_5F001447215.1_202015-11-20] 1,871 sequences; 55,029,878 total letters Query= NC_023177.1 Length=124688 Score E Sequences producing significant alignments: (Bits) Value seq1489 93.3 3e-14 >seq1489 Length=43664 Score = 93.3 bits (102), Expect = 3e-14 Identities = 143/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615 ||||| || || ||||| || | || ||||| ||||| ||| |||| ||| | Sbjct 22892 ATGCAGATCTTCGTCAAGACCCTCACCGGCAAGACCATCACCCTCGAGGTCGAGTCCTCT 22951 Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675 |||||| ||| | | ||||| |||||| || || || ||| | ||| || ||| Sbjct 22952 GATACTATCGACAACGTAAAGTCCAAGATTCAGGACAAGGAGGGCATCCCCCCTGACCAG 23011 Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735 ||| | || || | ||| || || ||||| ||||| | | || || | ||||||||| Sbjct 23012 CAGCGCCTCATCTTTGCTGGAAAGCAGCTCGAGGATGGCCGGACTCTGTCCGACTACAAC 23071 Query 107736 ATTCAAAAGGAGTCTACGTTGCAC 107759 ||||| ||||||||||| ||||| Sbjct 23072 ATTCAGAAGGAGTCTACTCTGCAC 23095 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 398867704487119