Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaporthe_20aspalathi_20[genbank_20GCA_5F001447215.1_202015-11-20] 1,871 sequences; 55,029,878 total letters Query= NC_023442.1 Length=120420 Score E Sequences producing significant alignments: (Bits) Value seq1489 95.1 9e-15 >seq1489 Length=43664 Score = 95.1 bits (104), Expect = 9e-15 Identities = 161/231 (70%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 29558 GTCCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCG 29617 |||| || | | |||||||||||| || ||||| || || || || ||||| || || | Sbjct 23348 GTCCGCCACGGAGACGCAGCACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCAG 23289 Query 29618 CAATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCG 29677 | ||| || || || || ||||||||||| | || | | ||||| || || | Sbjct 23288 AGAGGGTCCGGCCGTCTTCCAGCTGTTTGCCAGCGAAAATGAGACGCTGCTGGTCTGGTG 23229 Query 29678 GAATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCT 29736 | || ||||| ||||| || ||| |||| ||||| | || | ||||| || || Sbjct 23228 GGATGCCCTCCTTGTCCTG-AATCTTTGACTTGACGTTGTCAATCGTGTCCGACGACTCC 23170 Query 29737 ACTTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATT 29787 || || || || || || || || || | ||| || ||||| ||||||||| Sbjct 23169 ACCTCGAGCGTGATCGTCTTCCCCGTCAGGGTCTTGACAAAGATCTGCATT 23119 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 385210415918811