Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaporthe_20aspalathi_20[genbank_20GCA_5F001447215.1_202015-11-20] 1,871 sequences; 55,029,878 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq1209 374 8e-99 seq561 145 7e-30 seq427 138 1e-27 seq1489 116 4e-21 seq28 114 1e-20 >seq1209 Length=374226 Score = 374 bits (414), Expect = 8e-99 Identities = 1154/1759 (66%), Gaps = 51/1759 (3%) Strand=Plus/Minus Query 148047 TTAAACGACTGGCTCTGGTCAATGAACGCGCCACGGTCAGCGGCCATTT---CAATGAGT 148103 |||| ||||| |||||| ||||| |||||||||||||| ||||| | |||| || Sbjct 94412 TTAAGTGACTGAGACTGGTCGATGAAGGCGCCACGGTCAGCAGCCATCTGCACAATT-GT 94354 Query 148104 CGCTTTATCTTCATCTCCCAGGCCGTCTTGTACAGCCGCTTGATATGATCGGGAATGCCG 148163 | | | || |||||| | |||||||||||| |||||||| | | || |||| | Sbjct 94353 CCTCTGAGAG--ATTTCCCAGACGGTCTTGTACAGCGCCTTGATATCAGCCGGGATGCTG 94296 Query 148164 TCGATGCGCTGCACCGAGCCGCGGTGCGCAAAAATCTGATTGCGCATTTCGTCCGTGTAT 148223 || |||||| || ||| | || | || | || ||| | || | | Sbjct 94295 GGAATATTCTGCACGGAACCGTCCTCGGCGATGATACGGTTCTTCATGGCCTCAGACCAC 94236 Query 148224 AGGTTGAGCTCGATCAGGTCATCGATCAGATACTGATTCACCACCTGAAACTCGCCGGCG 148283 | | ||||| ||||||| || || | | || || ||||| |||||||| ||| Sbjct 94235 AAGCCAAGCTCTGTCAGGTCCCTGAGAAGCCAAGGGTTGACGACCTGGAACTCGCCAGCG 94176 Query 148284 AGCACGCGCCGCAGATACACGTTGCTCGTAAACGGTTCAAACGACTCGTTGTTGCCCAAA 148343 ||||| || ||| | || | |||| ||| | || || || ||||||||||||||| Sbjct 94175 AGCACACGTCGCTGGTAGATGTTGGAGGTATATGGCTCGAAGCACTCGTTGTTGCCCAGG 94116 Query 148344 ATCTGCGCGGTCGTTGCCGTGGGCATGTACGCTACCAGCAGCGAGTTGCGCAAACCGCGA 148403 ||||||| ||| | ||| || |||||| || | || || |||||| | ||| Sbjct 94115 ATCTGCGAGGTGGATGCAGTAGGCATGGGTGCCATCAACAAGCTGTTGCGAATACCAGTC 94056 Query 148404 TTTTTTATTTTGCGCTTCAGAGCCGCCCAGTCCCAGAGCGGCGACGGTGTCACGTTCCAC 148463 | || || ||| ||| || || |||||||||| || || || | ||||||||| Sbjct 94055 TCCTTGATCTTGGCCTTGAGGGCGTCCCAGTCCCACAGGTCAGAAGGCTTGACGTTCCAC 93996 Query 148464 ATGTCGTACTGCAGAATGCCGCGGCTAG-CGGGGCTGCCCTCGTACGAGCTGTACGGTCC 148522 |||||| |||| || ||||| | || | |||||||||||||||| | |||| | || Sbjct 93995 ATGTCGAACTGGAGGATGCC-CTGCGACACGGGGCTGCCCTCGTATGTCTTGTATGTGCC 93937 Query 148523 GTGCGCCGCCGCCAGTTCGCAGCTCGCCTCGAGCGCGCCGTAGTAAATCGTCTCGGCAAT 148582 | | || || | |||| | || ||| || | | ||| || |||||| || Sbjct 93936 TTCCACCTTGGCAATGTCGCTGGATGCTGTGAGAGCAGCATGGTAGATGGTCTCGAAGAT 93877 Query 148583 TTGCCTGTTGAGC---AGCGCCGCCGACTCGCTTTCGTACGGCATACGCAGCCGCACAAA 148639 |||| |||| ||| ||||| | | | ||| | |||||||| || || || Sbjct 93876 TTGCTTGTTCAGCTCACGCGCCTCGG---GGGAATCGAAGGGCATACGAAGAGCCAAGAA 93820 Query 148640 CGCGTCGGCAAGGCCCTGTACGCCCACGCCAATGGGCCGGTGTTTAATGTTGGAGAGGCG 148699 || |||||||| ||||| ||||| || ||||| || |||||| |||||| | | Sbjct 93819 TGCATCGGCAAGACCCTGAACGCCGACACCAATAGGTCGGTGTCGCATGTTGCTGTTGTA 93760 Query 148700 CGCGCTCTCGAGCGGATAGTGGTTGCGGTCGATGATCTTG-TCAAGATTGCGCACCACCA 148758 || || | ||| ||||||||| ||||| |||||| ||||| ||||| || || | Sbjct 93759 TGCCTCCTTCACCGGGTAGTGGTTGACATCGATAATCTTGTTCAAG-TTGCGGACGACAA 93701 Query 148759 CCTTTGTAATTCTGCGCAGCAATTCAAAATCGTA------CTTGTCATCTACGATGCAT- 148811 ||| || | | ||||| | || | ||| ||||||| ||| | || Sbjct 93700 CCTGAGTGACCTCGTGCAGCTGCTGGAAGTTGTAGCAGTTGTTGTCATAATCGACGTATG 93641 Query 148812 -CGGTTCACGGCGATAGAGGCTAGATTGCACACGGCCGTCTCATCCGGGGCGCTGTACTC 148870 ||| || || || || || || ||||| || || |||||||||||| |||||| Sbjct 93640 CCGG--CAGAGCAATGGAAGCCAGGTTGCAGACAGCGACCTCATCCGGGGCCGAGTACTC 93583 Query 148871 TACGATCTCGGCGCACAGATT---GCTGCATTTGATCACGCCCACGTTCTTTTGATTGCT 148927 | |||||||| ||| || || ||||| ||| ||||| |||||| || ||||| Sbjct 93582 GATGATCTCGGTGCAGAGGTTAGAGCTGC---GGATGGTGCCCAGGTTCTTCTGGTTGCT 93526 Query 148928 CTTGCTG-TTGCACGCGTCCTTGTACAGCATGTACGGTCCGCCAGTTTCCACCTGCGTTT 148986 ||| | | |||| | || ||||||||||| | || ||||| || ||| | | Sbjct 93525 CTTCCGGTTTGCGTG-ATCTTTGTACAGCATAAAGGGGTTACCAGTCTCGGTCTGAGCCT 93467 Query 148987 CCACTATG--AACCGATGCAGGTCCTGCGCGCGCACTTGCTGCTCGTAGCGACCCTCCTG 149044 | | ||| | | | ||| | ||| || || | || | ||| |||||||| Sbjct 93466 CAAGGATGGCATACCA--CAGCTTCTGGGCCTTCAGTGTCTTACGGCCGCGGCCCTCCTG 93409 Query 149045 CTCGTA--TAAAGTATACAGCCGCTCGAACGCCTCGCCGTAGCAATCGTCGAGACCGGGG 149102 |||||| | ||| | || ||| ||| |||| |||||||| ||| |||| || ||| Sbjct 93408 CTCGTACTTCTCGTAGAGGGC--CTCAAACTCCTCACCGTAGCAGTCGGCGAGGCCCGGG 93351 Query 149103 CACTTGTGCGGGCACATGAGCGACCACACGCCGTCCGCGTACACGCGCTTCATAAACAGA 149162 |||| || |||||||| || | ||| | |||| | | || |||||||| |||||| Sbjct 93350 CACTCGTTGGGGCACATAAGGGTCCAGTCACCGTTCTTCTCGACCCGCTTCATGAACAGA 93291 Query 149163 TCGGGCACCCAGAGCGCGTACATGAGGTCGCGCGCCTTGCAGTCTTCGGCGCCCATGTTG 149222 || || | |||||| || | ||||| || || | || || || ||| Sbjct 93290 TCAGGGATCCAGAGAGCAAGGAAAAGGTCACGAGCTCGGATCTCCTCCTTACCGTGGTTC 93231 Query 149223 CGGCGCAGGTTGAGCACGCTGAATATGTCCGCGTGCCACGGCTCAATGTACACCGCGAGC 149282 ||||||| ||| | ||| | || |||||||||||||| | ||| | |||| Sbjct 93230 TTCCGCAGGTCGAGGAACTCGAAGACATCAGCGTGCCACGGCTCGAGGTAAATAGCGAAG 93171 Query 149283 GCGCCCTTGCGC---TTGCCGCCCTGGTCGACGTGGCGCACCATGTTGTTAAACACTCGA 149339 || || ||| ||||| ||||||||||| | || | ||||||| || ||||| Sbjct 93170 GCACCGGGACGCTTGTTGCCACCCTGGTCGACATAACGGGCAGTGTTGTTGAAGACTCGC 93111 Query 149340 ACCATAGGTTCAATGCCACTGGCAGTGCCGTTAGT-AGAGCTA-ATGCGACTGCCGCGCG 149397 | ||| || ||||| ||| || ||||| || ||| | | ||| |||| | Sbjct 93110 AGCATGGGAGTGATGCCGTTGGAGGTACCGTTGGTGCCAGCGATGTACGA--GCCGGTGG 93053 Query 149398 CTCGCACTTTGTGCACGTTGACGCCGATGCCGCCGCCGTACTTTGAGATGGCCGCGCA-G 149456 | || | ||| ||||| | ||||||||| ||| | ||| ||||| || || | Sbjct 93052 CACGGATACGGTGGACGTTCAGGCCGATGCCTCCGGCCATCTTGGAGATCATGGCACATG 92993 Query 149457 TCGCCGAGCGTCGAGTAGATGCCCTCGATGCTGTCGCGCTTCATGGTCAGCAGAAAGCAC 149516 || ||| || |||||||||||||||||||| ||||||| | || ||||| Sbjct 92992 TC-TTGAGTGTGTCATAGATGCCCTCGATGCTGTCCTCCTTCATGTCGACGAGGAAGCAA 92934 Query 149517 GAGCACATTTGCGGAAAACGCGTGCCGGCCGCGAACATGGTGGGGCTGGCGTGTGTAAAA 149576 || ||| || || | ||||| || ||| | ||||| ||| || || || Sbjct 92933 GATGACAGCTGGGGCTGGGGAGTGCCAGCATTGAATAGTGTGGGCGAGGCATGGGTGAAG 92874 Query 149577 TATTTCTGGCTCATCATCTCGTACGACTCGAGCACGCGGTCCATGTCATCGCCATGGATG 149636 | || | ||| | | ||| | ||||| || | |||| |||||||| |||| Sbjct 92873 AACTTGTTTGACATGAGGTTGTAGGTCTCGATGACCCTCTCCACATCATCGCCCCAGATG 92814 Query 149637 CCTATGGCGACGCGCATCAGCATATGCTGCGGTCGCTCCGCCACTTTGTTTCCAATTTTG 149696 || | || || ||||| | ||| ||||| || ||||| | |||||| | | || Sbjct 92813 CCAACTGCAACACGCATGATCATGTGCTGTGGCCGCTCGACAACTTTGCCGTCGAGCTTC 92754 Query 149697 AGCAAGTAGCCGTTTTCTAGTGTCTTGTAGCCAAAGTACTTGTAGTCAAAGTCGCGGCCG 149756 || | |||| | || || |||||| | || ||||| | |||| | |||||||| | Sbjct 92753 AGGAGGTAGGAGCGCTCGAGGGTCTTGAACCCGAAGTATTGGTAGCCGAAGTCGCGATCA 92694 Query 149757 TGGTCAATGGCGGCGTCGA 149775 | | ||||||| | ||||| Sbjct 92693 TAGACAATGGCCGAGTCGA 92675 >seq561 Length=46336 Score = 145 bits (160), Expect = 7e-30 Identities = 351/526 (67%), Gaps = 29/526 (6%) Strand=Plus/Minus Query 120351 CTTGTACTCGCCGACGCGTTTCTCAAAAAAGTTTGTTTTGCCCTCCATCGAAATGTTGTT 120410 || ||| || ||||| || ||||| || ||||| || ||||| | | || ||||| | Sbjct 8528 CTGGTAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCACCGAGGGAGATGTTCTC 8469 Query 120411 CATAAACTCGAACGGGTTGCTCGCGTTAAAGTATTTCGGCTGGCCCAACTGTACGAGCAG 120470 ||| || ||||| ||||| || || | ||| | ||||| || || || Sbjct 8468 CATGAAGTCGAAGGGGTTCGACGACTTGTACACCTTCTCGTTGCCCAGAGCGACCAGGAG 8409 Query 120471 TCGGTCCGCTACAAACTCAATGTACTCGCACATGGACTGCGCGTTCATGCCCAGCAACGC 120530 ||||| || || ||||||||||||| |||| | | ||||||||| |||| || Sbjct 8408 GCGGTCGGCGACGAACTCAATGTACTGCTTCATGAGGTTGGAGTTCATGCCGAGCAGGGC 8349 Query 120531 CACCGGCAACGCCGACGTGAAAAACTCCTTCTCAATGTCCACCGCCTCCTTGAACATGGC 120590 || | ||| || | || |||||||| || || ||||| ||| ||| | Sbjct 8348 GCATGGAAGGGCCTCGGTCAGGAATTCCTTCTCGATCATGACGGCCTCAGTGATGATGTC 8289 Query 120591 GAGCATAGTGTGGCCGGGCATCTTGTGTTCGATGCGCGTTC----GGT---AGTACAG-- 120641 ||| || || |||| || | ||| |||| ||| || |||| Sbjct 8288 C---------TGGACGCGCTGCTTGC-TTGG--GCG-GTTCCTGAGGTGCGAGAACAGCA 8242 Query 120642 -GCACGCAAAGTCCGTGTGCAGGCCCTCGTCGCGCGATATCAGCTCGTTGCTAAACGTCA 120700 ||| || ||||| |||||||||||||| || || || || ||||||||| ||| || | Sbjct 8241 GGCAGGCGAAGTCGGTGTGCAGGCCCTCATCACGAGAGATAAGCTCGTTGGAAAAGGTGA 8182 Query 120701 GGCCGGGCATGATGCCTTTCGTCTTGATGTAGAATATGGCGGCAAAGCTGCCCGAAAAGA 120760 | || ||||||| ||| | |||||| |||| |||| ||| ||| ||| |||| Sbjct 8181 GACCAGGCATGAGGCCACGCTTCTTGAGCCAGAAGATGGAGGCGAAGGCGCCGCTGAAGA 8122 Query 120761 ACACGCCCTCCACGATGGCAAAGGCGACCATGCGCTCGGCCAACGTCGCCGTCTTGCTGT 120820 | | |||||| ||| || |||||||||| ||||| ||| | || | || || || Sbjct 8121 AGATGCCCTCGACGGCAGCGAAGGCGACCAGGCGCTGGGCATAGGT---GGACTCGCGGT 8065 Query 120821 C---GATCCACTTCATGGCCCACTCGGCCTTTTTGCGCACGCACGG 120863 | ||||||||||| ||||| |||||||| ||||| | ||| || Sbjct 8064 CCTGGATCCACTTCAGAGCCCAGTCGGCCTTCTTGCGGATGCAGGG 8019 >seq427 Length=47822 Score = 138 bits (152), Expect = 1e-27 Identities = 152/200 (76%), Gaps = 2/200 (1%) Strand=Plus/Minus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521 ||||||||| ||||| || ||||| ||| | ||| | | | |||||||||||||||| Sbjct 19368 GGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCA-TCCTCGAGCTGCTTGC 19310 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | ||| | || || ||||||||||| || |||||||| |||||||| |||||| || Sbjct 19309 CGGCGAAGATCAGGCGCTGCTGGTCTGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACT 19250 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 ||| | || | ||||||| | |||||| || | ||||| ||| ||||| || || | Sbjct 19249 TGACATTGTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATGGTCTTGCCCGTGAGGG 19190 Query 133642 TTTTTACGAAAATCTGCATG 133661 | || ||||| ||||||||| Sbjct 19189 TCTTCACGAAGATCTGCATG 19170 >seq1489 Length=43664 Score = 116 bits (128), Expect = 4e-21 Identities = 146/198 (74%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || ||||| ||||| || ||||| ||| || || | | | |||||||||||||| || Sbjct 23088 GTAGACTCCTTCTGAATGTTGTAGTCGGACAGAGTCCGGCCA-TCCTCGAGCTGCTTTCC 23030 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 || | ||||| ||||||||||| || |||||||| |||||||| ||||| ||| Sbjct 23029 AGCAAAGATGAGGCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGAATCTTGGACTT 22970 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 | | || | || || | || ||| || |||| ||||| ||| |||||||| || || Sbjct 22969 TACGTTGTCGATAGTATCAGAGGACTCGACCTCGAGGGTGATGGTCTTGCCGGTGAGGGT 22910 Query 133643 TTTTACGAAAATCTGCAT 133660 || ||||| |||||||| Sbjct 22909 CTTGACGAAGATCTGCAT 22892 Score = 114 bits (126), Expect = 1e-20 Identities = 119/156 (76%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 133505 GTCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTT 133564 ||| || ||||| ||||| ||| ||||||| ||||||||||| || |||||||| ||||| Sbjct 23275 GTCTTCCAGCTGTTTGCCAGCGAAAATGAGACGCTGCTGGTCTGGTGGGATGCCCTCCTT 23216 Query 133565 GTCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGAC 133624 ||| |||||| ||||| | |||| |||||| | | |||||| |||| |||| Sbjct 23215 GTCCTGAATCTTTGACTTGACGTTGTCAATCGTGTCCGACGACTCCACCTCGAGCGTGAT 23156 Query 133625 GGTTTTGCCGGTCAGAGTTTTTACGAAAATCTGCAT 133660 || || || ||||| || || || || |||||||| Sbjct 23155 CGTCTTCCCCGTCAGGGTCTTGACAAAGATCTGCAT 23120 >seq28 Length=192849 Score = 114 bits (126), Expect = 1e-20 Identities = 113/146 (77%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 133506 TCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTG 133565 ||||| ||||||||||| ||| | || || ||||||||||| || |||||||| |||||| Sbjct 42532 TCCTCAAGCTGCTTGCCGGCGAAGATCAGTCGCTGCTGGTCAGGGGGGATGCCCTCCTTG 42473 Query 133566 TCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACG 133625 || |||||| ||||| | || | ||||| | || |||||| |||| ||||| | Sbjct 42472 TCCTGGATCTTCGACTTGACGTTGTCGATGGTGTCAGAGGACTCCACCTCGAGGGTGATG 42413 Query 133626 GTTTTGCCGGTCAGAGTTTTTACGAA 133651 || ||||| ||||| || || ||||| Sbjct 42412 GTCTTGCCCGTCAGGGTCTTCACGAA 42387 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483409493996040