Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaporthe_20aspalathi_20[genbank_20GCA_5F001447215.1_202015-11-20] 1,871 sequences; 55,029,878 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq1209 199 4e-46 seq1489 82.4 7e-11 >seq1209 Length=374226 Score = 199 bits (220), Expect = 4e-46 Identities = 984/1539 (64%), Gaps = 43/1539 (3%) Strand=Plus/Minus Query 146893 TTGACCACTTGAAACTCGCCCGCCAGCACACGTCTGAGATACACATTGCTAGTGAAAGGC 146952 ||||| || || |||||||| || |||||||||| | || | ||| || | ||| Sbjct 94199 TTGACGACCTGGAACTCGCCAGCGAGCACACGTCGCTGGTAGATGTTGGAGGTATATGGC 94140 Query 146953 TCAAAAGACTCATTATTGCCTAATATTTGGGCCGTGGTTGCGGTAGGCATGTACGCCACC 147012 || || |||| || ||||| | || || | |||| ||| ||||||||| |||| | Sbjct 94139 TCGAAGCACTCGTTGTTGCCCAGGATCTGCGAGGTGGATGCAGTAGGCATGGGTGCCATC 94080 Query 147013 AACAATGAATTTCGCAGACCGTACGCACGGATGTTGTCCTTCAAAGTTTGCCAGTCCCAC 147072 ||||| || || | ||| | | ||| ||| |||| | | | |||||||||| Sbjct 94079 AACAAGCTGTTGCGAATACCAGTCTCCTTGATCTTGGCCTTGAGGGCGTCCCAGTCCCAC 94020 Query 147073 ATCGACGAGGGCGTCACGTTCCACATGTCGTACTGGAGCA--CTCCTCGACTGGCGGGAC 147130 | || ||| | ||||||||||||||| ||||||| | | | |||| |||| | Sbjct 94019 AGGTCAGAAGGCTTGACGTTCCACATGTCGAACTGGAGGATGCCCTGCGAC--ACGGGGC 93962 Query 147131 TGCCAGCGAACGTAGTGTAGCTTCCGTCGCGCTGCGCCAATTCACAGCTTGCCTCGAGCG 147190 |||| || | || |||| | || || || || | || | | ||| ||| | Sbjct 93961 TGCCCTCGTATGTCTTGTATGTGCCTTCCACCTTGGCAATGTCGCTGGATGCTGTGAGAG 93902 Query 147191 CTCCATAGTATATGGTTTCGGCGATTTGTTTGTTTAGGACGGTCGCTTCTTCGCTCTCGT 147250 | ||| ||| ||||| ||| |||||| ||||| || | ||| || | ||| Sbjct 93901 CAGCATGGTAGATGGTCTCGAAGATTTGCTTGTTCAGCTCACGCGCCTCGGGGGAATCGA 93842 Query 147251 AAGGCATACGCAGAAGCACAAAGGCATCGGCCAAACCCTGGATACCGACGCCGATAGGTC 147310 | |||||||| ||| || || |||||||| | |||||| | ||||| || ||||||| Sbjct 93841 AGGGCATACGAAGAGCCAAGAATGCATCGGCAAGACCCTGAACGCCGACACCAATAGGTC 93782 Query 147311 GATGCTTTTCGTTGCTGCGCTTCGCGCTCGCT-ATGGGATAGTGGTTGCGATCAATAATC 147369 | || ||||||| | || ||| | | || ||||||||| ||| |||||| Sbjct 93781 GGTGTCGCATGTTGCTGTTGTATGC-CTCCTTCACCGGGTAGTGGTTGACATCGATAATC 93723 Query 147370 TTGTTGAGGTTACGCACTACAACTTTAGTTATTGTTTTGAGTTTCTCGAAATCATA--AG 147427 ||||| | ||| || || ||||| | ||| | | || | || ||| | || || Sbjct 93722 TTGTTCAAGTTGCGGACGACAACCTGAGTGACCTCGTGCAGCTGCTGGAAGTTGTAGCAG 93663 Query 147428 -TCCCGTCTTCGAC-ACGTACGCATTGGTTCACGGCGATAGACGCCAGATTGCAGACGGC 147485 | ||| | | ||||| || || || || || || ||||| |||||||| || Sbjct 93662 TTGTTGTCATAATCGACGTATGC--CGG--CAGAGCAATGGAAGCCAGGTTGCAGACAGC 93607 Query 147486 CGTCTCTTCGGCGTCGCTGTACTGCACGATTTCGGCGCACAGGTT---GCTGCATTTTAT 147542 ||| || | | | ||||| | ||| |||| ||| ||||| ||||| || Sbjct 93606 GACCTCATCCGGGGCCGAGTACTCGATGATCTCGGTGCAGAGGTTAGAGCTGC---GGAT 93550 Query 147543 GACTCCCAAATTTTGCTGATTGCTTTTCC-GATTGCACGCGTCTTTGAAGAGCATGTACG 147601 | |||| || | ||| ||||| |||| | |||| | |||||| | ||||| | | Sbjct 93549 GGTGCCCAGGTTCTTCTGGTTGCTCTTCCGGTTTGCGTG-ATCTTTGTACAGCATAAAGG 93491 Query 147602 GTCCGCCGGTCTCGACTTGCGTTTCAACGAT---AAACCTATGCAGGTCCTGCGCTCGCA 147658 | || |||||| || | |||| ||| | ||| ||| | ||| || || Sbjct 93490 GGTTACCAGTCTCGGTCTGAGCCTCAAGGATGGCATACC---ACAGCTTCTGGGCCTTCA 93434 Query 147659 CCCGCTGCCGATAGCGGCCCTCGTTTTCGTACCGCTCGTACAACCGCTCAAACTCGTCGC 147718 || || ||||||||| | |||||| |||||| | ||||||||| || | Sbjct 93433 GTGTCTTACGGCCGCGGCCCTCCTGCTCGTACTTCTCGTAGAGGGCCTCAAACTCCTCAC 93374 Query 147719 CGTAGCAATCGGCAAGGCCGGGACACTGATGCGGACACATCAGCGACCACATGTCGTCCG 147778 ||||||| ||||| ||||| || |||| | || ||||| || | ||| ||| | Sbjct 93373 CGTAGCAGTCGGCGAGGCCCGGGCACTCGTTGGGGCACATAAGGGTCCAGTCACCGTTCT 93314 Query 147779 CGTTAACGCGTCGCATAAACAGATCCGGCACCCACAGCGCGTACATAAGATCGCGCGCTT 147838 | || || ||| |||||||| || | ||| || || | ||| || || ||| Sbjct 93313 TCTCGACCCGCTTCATGAACAGATCAGGGATCCAGAGAGCAAGGAAAAGGTCACGAGCTC 93254 Query 147839 TGCAATCCTCGGCGCCCATGTTGCGTTTCAAAT-TAAGCACGCTATAGATGTCGGCGTGC 147897 | ||||| || ||| || | | | || | | ||| || |||||| Sbjct 93253 GGATCTCCTCCTTACCGTGGTTCTTCCGCAGGTCGAGGAACTCGA-AGACATCAGCGTGC 93195 Query 147898 CAGGGTTCAATGTAGACGGCCAGCGCACCTTTACGC---TTTCCGCCCTGGTCGACATGG 147954 || || || | ||| | || | ||||| |||| || || ||||||||||||| Sbjct 93194 CACGGCTCGAGGTAAATAGCGAAGGCACCGGGACGCTTGTTGCCACCCTGGTCGACATAA 93135 Query 147955 CGCACCATGTTGTTAAACACGCGCACCATGGGTTCCAGGCCGCTCGCAGTGCCGTTGGTG 148014 || | ||||||| || || |||| |||||| | |||| | | || ||||||||| Sbjct 93134 CGGGCAGTGTTGTTGAAGACTCGCAGCATGGGAGTGATGCCGTTGGAGGTACCGTTGGTG 93075 Query 148015 GAATTGATCTTGCTGCCGCGGGCTCGCACTTCGTGCACGTTAACGCCAATGCCGCCGCCG 148074 | ||| | |||| ||| || | ||| ||||| | ||| ||||| ||| | Sbjct 93074 CCAGCGATGTACGAGCCGGTGGCACGGATACGGTGGACGTTCAGGCCGATGCCTCCGGCC 93015 Query 148075 TACTTTGATATGGCAGCGCA-ATCGC-CCAATGTCGTGTAGATGCCGTCGATGCTGTCGT 148132 ||| || || || ||| || | | ||| |||||||| ||||||||||| | Sbjct 93014 ATCTTGGAGAT--CATGGCACATGTCTTGAGTGTGTCATAGATGCCCTCGATGCTGTCCT 92957 Query 148133 TTTTGACGCCAAGCAAAAAACACGAACACATTTGCGGAATCCGCGTTCCCGCCGAGAAAA 148192 || | | | | | || || || ||| || || | || || || ||| | Sbjct 92956 CCTTCATGTCGACGAGGAAGCAAGATGACAGCTGGGGCTGGGGAGTGCCAGCATTGAATA 92897 Query 148193 GGGTGGGACTCGCGTGCGTAAACAA--TTTTTGACTCATCATGCGATACGTCTCAAT-AG 148249 | ||||| || || || || || | ||||| ||| | | || ||||| || | Sbjct 92896 GTGTGGGCGAGGCATGGGTGAAGAACTTGTTTGA--CATGAGGTTGTAGGTCTCGATGAC 92839 Query 148250 CGTCTTCGATGTCGTCGCCGTGAATGCCCAGCGCGACGCGCATGAGCATGTGCTGTGGTC 148309 | || || | || ||||| ||||| | || || ||||||| |||||||||||| | Sbjct 92838 CCTC-TCCACATCATCGCCCCAGATGCCAACTGCAACACGCATGATCATGTGCTGTGGCC 92780 Query 148310 GTTCGGCAACTTGATTGTTGATCTTGAGAAGATATCCATTTTCGAGGGTTTTGTAACCAA 148369 | ||| |||||| || || ||| || || || |||||||| ||| | || | Sbjct 92779 GCTCGACAACTTTGCCGTCGAGCTTCAGGAGGTAGGAGCGCTCGAGGGTCTTGAACCCGA 92720 Query 148370 AGTACTTGTAATCAAAATCTAGCTCGTAAGCGATGGCCG 148408 |||| | ||| | || || | || || | ||||||| Sbjct 92719 AGTATTGGTAGCCGAAGTCGCGATCATAGACAATGGCCG 92681 >seq1489 Length=43664 Score = 82.4 bits (90), Expect = 7e-11 Identities = 147/215 (68%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 131909 CGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAA 131968 |||| ||||| || | | ||||| || || ||||||||||| | ||| || Sbjct 23334 CGCAGCACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTCCGGCCG 23275 Query 131969 TCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTA 132028 ||||| |||||||| || | | || |||||||| || ||||| || ||||| || || Sbjct 23274 TCTTCCAGCTGTTTGCCAGCGAAAATGAGACGCTGCTGGTCTGGTGGGATGCCCTCCTTG 23215 Query 132029 TCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGC 132088 || ||| ||| || | | || | || || | || |||||| |||| ||| | | Sbjct 23214 TCCTGAATCTTTGACTTGACGTTGTCAATCGTGTCCGACGACTCCACCTCGAGCGTGATC 23155 Query 132089 GTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 || || || ||||| || || | || |||||||| Sbjct 23154 GTCTTCCCCGTCAGGGTCTTGACAAAGATCTGCAT 23120 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476600053255560