Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaporthe_20aspalathi_20[genbank_20GCA_5F001447215.1_202015-11-20] 1,871 sequences; 55,029,878 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq1489 91.5 1e-13 >seq1489 Length=43664 Score = 91.5 bits (100), Expect = 1e-13 Identities = 149/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 27033 CGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCG 27092 |||| ||||| || | ||| || || || || || |||||||| | | | || || Sbjct 23334 CGCAGCACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTCCGGCCG 23275 Query 27093 TCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTA 27152 ||||| |||||||| || ||| ||||||||||||| || || || || | ||||| || Sbjct 23274 TCTTCCAGCTGTTTGCCAGCGAAAATGAGACGCTGCTGGTCTGGTGGGATGCCCTCCTTG 23215 Query 27153 TCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATA 27212 || ||||| || | | | || | ||||| | | || || || || || || Sbjct 23214 TCCTGAATCTTTGACTTGACGTTGTCAATCGTGTCCGACGACTCCACCTCGAGCGTGATC 23155 Query 27213 GATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 | || |||||||| || || |||||||| ||||| Sbjct 23154 GTCTTCCCCGTCAGGGTCTTGACAAAGATCTGCAT 23120 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424924710300552