Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Diaporthe_20aspalathi_20[genbank_20GCA_5F001447215.1_202015-11-20]
1,871 sequences; 55,029,878 total letters
Query= NC_028091.1
Length=196300
Score E
Sequences producing significant alignments: (Bits) Value
seq1209 228 1e-54
seq1718 82.4 1e-10
>seq1209
Length=374226
Score = 228 bits (252), Expect = 1e-54
Identities = 1137/1778 (64%), Gaps = 47/1778 (3%)
Strand=Plus/Minus
Query 110331 TGAACTGAATTGGTCGGGCTTTCGCCTTTGATCGGAGATAGTACATCCCGGTCTTGAGTC 110390
||||||| || ||| |||| |||| | ||||| |||||||| || |||||||| |
Sbjct 94537 TGAACTGGATGGGTGCGGCTGCTGCCTGGGTGCGGAGGTAGTACATGCCAGTCTTGAGAC 94478
Query 110391 CTTGTTTCCATGCGTACATATGCATAGAAGAGAGCTTGGACATCGTTGGACTTTC-CATG 110449
| | ||||| | | ||||| | || |||| ||| | ||| || || ||||
Sbjct 94477 CGAGCTTCCAGCCAGCGAAGTGCATGCTGGTGATCTTGCCCATGGATGG-CTCTCGCATG 94419
Query 110450 AAGAGGTTCAT--ACTTTGACTTTGGTCAATGAAGCGCCCCCGTTGTGCCGCCATATCAA 110507
|| ||| | ||| |||| |||| |||||| || || | || ||||| | |
Sbjct 94418 TGGATGTTAAGTGACTGAGACT--GGTCGATGAAGGCGCCACGGTCAGCAGCCATCTGCA 94361
Query 110508 TGACATCCTTCATCTTA---ATTTCCCAAACTGTGCGATAGAGATTCTTGATATCATCTG 110564
|| || ||| | |||||||| || || || || |||||||||| | |
Sbjct 94360 ---CAATTGTCCTCTGAGAGATTTCCCAGACGGTCTTGTACAGCGCCTTGATATCAGCCG 94304
Query 110565 GGATATCTGAGA-TATTCTGGATGGAACCCCCCGCCTTCACCATGAGATCCTTCATATCC 110623
|||| ||| || ||||||| | |||||| || | | || | | |||||| ||
Sbjct 94303 GGATG-CTGGGAATATTCTGCACGGAACCGTCCTCGGCGATGATACGGTTCTTCATGGCC 94245
Query 110624 TTGGACCAGAGACCAATCTTCTTGAGGTCATTGACGAGGTGCTTGTTGACAATGACAAAC 110683
| ||||| | |||| || | ||||| ||| || |||||| | |||
Sbjct 94244 TCAGACCACAAGCCAAGCTCTGTCAGGTCCCTGAGAAGCCAAGGGTTGACGACCTGGAAC 94185
Query 110684 TCACCTGCGAGGGTTCTTCTCAGGTAGATGTTTGTTGTGTATGGTTCAAAGCATTCATTA 110743
|| || ||||| | || | |||||||||| | || ||||| || ||||| || ||
Sbjct 94184 TCGCCAGCGAGCACACGTCGCTGGTAGATGTTGGAGGTATATGGCTCGAAGCACTCGTTG 94125
Query 110744 TTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGA 110803
|| |||| ||| || | |||||| || || ||||| ||||||||||| | ||||| |||
Sbjct 94124 TTGCCCAGGATCTGCGAGGTGGATGCAGTAGGCATGGGTGCCATCAACAAGCTGTTGCGA 94065
Query 110804 AGACCCTTCTCCTTGATGCGTTCCTTGAGAACATCCCAGTCGTA--GTTGAGCTTGGTTT 110861
| ||| |||||||||| ||||||| | |||||||| | | | || || ||
Sbjct 94064 ATACCAGTCTCCTTGATCTTGGCCTTGAGGGCGTCCCAGTCCCACAGGTCAGAA-GGCTT 94006
Query 110862 CACCTTCCCACATGTCAAACTGAAGCACCCCTTGGGACGCGGGAGAACCCTCAAAGGTTT 110921
|| |||| ||||||| ||||| || | || || ||| |||| ||||| | || |
Sbjct 94005 GACGTTCC-ACATGTCGAACTGGAGGATGCCCTGCGACACGGGGCTGCCCTCGTATGTCT 93947
Query 110922 CATAGGAACCTTGGGCTTCAGCCAATTCACAGCTCGCCTCCAGGGATGCGTGATACATGG 110981
|| | |||| | | || | || | | || || | || || || ||||
Sbjct 93946 TGTATGTGCCTTCCACCTTGGCAATGTCGCTGGATGCTGTGAGAGCAGCATGGTAGATGG 93887
Query 110982 TTTCAAAGATACGAGCATTCATCTCCTTGGCTTCATCTGAATCAAATG-CGTA-GCGGCA 111039
| || ||||| | |||| ||| || || ||||| || | | || | |
Sbjct 93886 TCTCGAAGATTTGCTTGTTCAGCTCACGCGCCTCGGGGGAATCGAAGGGCATACGAAGAG 93827
Query 111040 CAAAATAAATACATCCGCGAGACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATT 111099
| || ||| |||| || ||||| ||||| || | ||||||||||| ||||||||| ||
Sbjct 93826 CCAAG--AATGCATCGGCAAGACCCTGAACGCCGACACCAATAGGTCGGTGTCGCATGTT 93769
Query 111100 AGACTTTCGCGCAGTCTCAACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTT 111159
|| || || || || || || || || | ||| | ||
Sbjct 93768 GCTGTTGTATGCCTCCTTCACCGGGTAGTGGTTGACATCGATAATCTTGTTCAAGTTGCG 93709
Query 111160 GGTAACAATCTTTGTGATTTCATGAAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCATT 111219
| |||| || |||| || || || | | | | | | | || | ||
Sbjct 93708 GACGACAACCTGAGTGACCTCGTGCAGCTGCTGGAAGTTGTAGCAGTTGTTGTCATAATC 93649
Query 111220 GACATACTTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGT 111279
||| || || || || || || |||| ||||| ||||| ||||||| | |
Sbjct 93648 GACGTATGCCGGCAGAGCAATGGAAGCCAGGTTGCAGACAGCGACCTCATCCGGGGCCGA 93589
Query 111280 GTACTCTAAAATTTCTGTACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTT 111339
|||||| | || || || || | ||| || || || || |||| ||||| |||||
Sbjct 93588 GTACTCGATGATCTCGGTGCAGAGGTTAGAGCTGCGGATGGTGCCCAGGTTCTTCTGGTT 93529
Query 111340 ACTCTTCTTGTT-GCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTG 111398
|||||| ||| || | ||| ||||| ||||| |||| | || ||||| ||||| |
Sbjct 93528 GCTCTTCCGGTTTGCGTG-ATCTTTGTACAGCATAAAGGGGTTACCAGTCTCGGTCTGAG 93470
Query 111399 ATTTGAGAATAGCCTTCCAAA-CATCGGCGGCTGGTACAATGGCGTT-GGCC-CGTCCCT 111455
| || || || | ||| | | || | | || || || | | |||| || ||||
Sbjct 93469 CCTCAAGGATGGCATACCACAGCTTCTGGGCCTT---CAGTGTCTTACGGCCGCGGCCCT 93413
Query 111456 CCGCCTCGTACTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTG 111515
|| ||||||||| ||||||||| |||||||||||||| ||||| ||| || |
Sbjct 93412 CCTGCTCGTACTTCTCGTAGAGGGCCTCAAACTCCTCACCGTAGCAGTCGGCGAGGCCCG 93353
Query 111516 GTGCCTTGTCTGGACAGAAAAGAGACCATTGACCACCTTCCTCAACCCGCTTCATGAAAA 111575
| || || || || | ||| | ||| | ||| | ||| |||||||||||||| |
Sbjct 93352 GGCACTCGTTGGGGCACATAAGGGTCCAGTCACCGTTCTTCTCGACCCGCTTCATGAACA 93293
Query 111576 GGTCTGGAATCCACAG-GGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGG 111634
| || || ||||| || | | | ||| || || | | || ||| || | ||| |||
Sbjct 93292 GATCAGGGATCCAGAGAGCAAGGAAA-AGGTCACGAGCTCGGATCTCCTCCTTACCGTGG 93234
Query 111635 TTGAGTCGTAACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCG 111694
|| || | || |||||||| | || ||| |||||||| ||||| || || | |||
Sbjct 93233 TTCTTCCGCAGGTCGAGGAACTCGAAGACATCAGCGTGCCACGGCTCGAGGTAAATAGCG 93174
Query 111695 ATAGATCCCTTTCGACGC------CCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAAT 111748
| | || ||||| ||| | || | ||||| || || ||| ||| ||
Sbjct 93173 AAGGCACC---GGGACGCTTGTTGCCACCCTGGTCGACATAACGGGCAGTGTTGTTGAAG 93117
Query 111749 ACGCGAAGCATTGGAATAATACCATCTGATTGACCATTTGT-CCCCCGA-ATACGAGATT 111806
|| || ||||| ||| | || || | || ||| || || || ||| ||||||
Sbjct 93116 ACTCGCAGCATGGGAGTGATGCCGTTGGAGGTACCGTTGGTGCCAGCGATGTACGAG--C 93059
Query 111807 TATTGGCTCTCACATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCG 111866
|||| | | | |||| || || || || || || ||| ||| ||||| |
Sbjct 93058 CGGTGGCACGGATACGGTGGACGTTCAGGCCGATGCCTCCGGCCATCTTGGAGATCATGG 92999
Query 111867 CACACTCCGTAAGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGA 111926
|||| | | || || ||||||| || | ||| ||||||||| || ||| ||||
Sbjct 92998 CACATGTCTTGAGTGTGTCATAGATGCCCTCGATGCTGTCCTCCTTCATGTCGACGAGGA 92939
Query 111927 AGCAACTGGACATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAA 111986
||||| |||| ||| || || || ||||||||||| || || || | || ||
Sbjct 92938 AGCAAGATGACAGCTGGGGCTGGGGAGTGCCAGCATTGAATAGTGTGGGCGAGGCATGGG 92879
Query 111987 TGAACATACCT-TGGGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCG 112045
|||| | || | | ||||| || ||| ||||| | ||| || | || || ||
Sbjct 92878 TGAAGA-ACTTGTTTGACATGAGGTTGTAGGTCTCGATGACCCTCTCCACATCATCGCCC 92820
Query 112046 TGGATGCCGATTGCGACCCGCATGAACATGTACTGTGG 112083
|||||| | ||| || ||||||| ||||| ||||||
Sbjct 92819 CAGATGCCAACTGCAACACGCATGATCATGTGCTGTGG 92782
>seq1718
Length=289554
Score = 82.4 bits (90), Expect = 1e-10
Identities = 123/173 (71%), Gaps = 4/173 (2%)
Strand=Plus/Plus
Query 11752 GATGAATGGGACATTTGATTCACCCGCGATGGCTCGGGCGAGGAGGGTCTTTCCCGTACC 11811
|| ||| ||||| | ||||||||||| ||| || || |||||||| ||||| |||||
Sbjct 243237 GAAGAAAGGGACGCCAGCTTCACCCGCGACGGCCCGTGCCAGGAGGGTTTTTCCGGTACC 243296
Query 11812 TGGCTTACCCGCGAGAAGGGCGCCTCGGGGGATCTTGGCACC--ACTTCCAAAATATCTC 11869
||| ||| | |||||| | ||| || | |||| |||| | || | | | |
Sbjct 243297 AGGCGGACCAACCAGAAGGACTCCTTTTGGCAGCTTGCCACCCAAGGTCGAGA--ACTTG 243354
Query 11870 TCGGGTTGCTTGAGAAAATCCACAATCTCTTCAAGTTCATCTTTGGCCGCGTC 11922
||||| | |||||| || || |||||||| | || || || |||||| ||||
Sbjct 243355 TCGGGGTTCTTGAGGAACTCGACAATCTCCTGGAGCTCCTCCTTGGCCTCGTC 243407
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 628017311901600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |