Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaporthe_20aspalathi_20[genbank_20GCA_5F001447215.1_202015-11-20] 1,871 sequences; 55,029,878 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq1209 286 4e-72 >seq1209 Length=374226 Score = 286 bits (316), Expect = 4e-72 Identities = 1107/1719 (64%), Gaps = 43/1719 (3%) Strand=Plus/Minus Query 117805 TGAACTGAATGGGTCTCGCCTTGGCCTTTGATCGGAGGTAGTACATCCCCGTCTTGAGCC 117864 ||||||| |||||| || |||| | |||||||||||||| || |||||||| | Sbjct 94537 TGAACTGGATGGGTGCGGCTGCTGCCTGGGTGCGGAGGTAGTACATGCCAGTCTTGAGAC 94478 Query 117865 CCTGCTTCCAGGCATACATATGCATTGAGGACAACTTGGAGAGGGTTGGACTTTC-CATG 117923 | |||||||| || | ||||| || | |||| | || ||| || || |||| Sbjct 94477 CGAGCTTCCAGCCAGCGAAGTGCATGCTGGTGATCTTGCCCATGGATGG-CTCTCGCATG 94419 Query 117924 AAGAGGTTCATACTTTGGGATTGATCGATGAAGCGTCCCCGATCCGCCGCCATATCAATC 117983 || ||| | || || || ||||||||| || || || || ||||| | | Sbjct 94418 TGGATGTTAAGTGACTGAGACTGGTCGATGAAGGCGCCACGGTCAGCAGCCATCTG---C 94362 Query 117984 ACATCCTTCATCTT---GATTTCCCACACAGTCCTGTAGAGGTTCTTAATATCATCTGGG 118040 ||| || ||| ||||||||| || ||| |||| || ||| |||||| | ||| Sbjct 94361 ACAATTGTCCTCTGAGAGATTTCCCAGACGGTCTTGTACAGCGCCTTGATATCAGCCGGG 94302 Query 118041 ATATCCACGATATTTTGGATGGATCCACCCGCCTTGACCATGAGA---TCCTTCATATCC 118097 || ||||| || | ||| ||| ||| | | |||| | | |||||| || Sbjct 94301 ATGCTGGGAATATTCTGCACGGA---ACCGTCCTCGGCGATGATACGGTTCTTCATGGCC 94245 Query 118098 TTTGACCAGAGACCAATCTTTTTGAGATCCTCCACGAGATGCTTA---TTGACAACAACA 118154 | ||||| | |||| || | | || ||| |||| || | ||||| || Sbjct 94244 TCAGACCACAAGCCAAGCTCTGTCAGGTCCCT---GAGAAGCCAAGGGTTGACGACCTGG 94188 Query 118155 AACTCACCCGCGAGGGTGCGTCTCAGATAGATATTGGTCGTGTATGGCTCAAAGCACTCA 118214 ||||| || ||||| |||| | | ||||| |||| || |||||||| |||||||| Sbjct 94187 AACTCGCCAGCGAGCACACGTCGCTGGTAGATGTTGGAGGTATATGGCTCGAAGCACTCG 94128 Query 118215 TTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTA 118274 ||||| |||| ||| || | ||||| || || |||||||||||||| | | |||||| Sbjct 94127 TTGTTGCCCAGGATCTGCGAGGTGGATGCAGTAGGCATGGGTGCCATCAACAAGCTGTTG 94068 Query 118275 CGGAGACCCTTTTCCCTAATGCGTTCCTTGAGAGCGTCCCAGTCGTA--GTTGAGCTTTG 118332 || | ||| | ||| | || ||||||| ||||||||||| | | | || | Sbjct 94067 CGAATACCAGTCTCCTTGATCTTGGCCTTGAGGGCGTCCCAGTCCCACAGGTCAGAA--G 94010 Query 118333 TCTCCCCCTGCCACATATCAAACTGGAGGATACCTTGGGACGCTGGCGATCCCTCAAATG 118392 || | | |||||| || ||||||||||| || || ||| | || ||||| ||| Sbjct 94009 GCTTGACGTTCCACATGTCGAACTGGAGGATGCCCTGCGACACGGGGCTGCCCTCGTATG 93950 Query 118393 TCTCATATGGGCCCTCAACCTCCGCCAATTCGGAGCTCGCCTCGAGGGCTGCGTGATACA 118452 ||| |||| ||| || |||| || | ||| | || ||| || || || || | Sbjct 93949 TCTTGTATGTGCCTTCCACCTTGGCAATGTCGCTGGATGCTGTGAGAGCAGCATGGTAGA 93890 Query 118453 TTGTTTCAAAAATGCGAGCATTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGTCG-- 118510 | || || || || | |||| | |||||| |||||| || | | || Sbjct 93889 TGGTCTCGAAGATTTGCTTGTTCAGCTCACGCGCCTCGGGGGAATCGAAGGGCATACGAA 93830 Query 118511 GCACAAAATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCAT 118570 | | || ||| |||| || ||||| || || |||| ||||| || || |||| ||| Sbjct 93829 GAGCCAAG--AATGCATCGGCAAGACCCTGAACGCCGACACCAATAGGTCGGTGTCGCAT 93772 Query 118571 ATTAGACTTCCGAGCGGTCTCCACGGGATAAAAATTCCTATCGATAACCCTATTTAGATT 118630 || || || || ||| || || || |||||||| | | || | || Sbjct 93771 GTTGCTGTTGTATGCCTCCTTCACCGGGTAGTGGTTGACATCGATAATCTTGTTCAAGTT 93712 Query 118631 TTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTC 118690 | |||||||| |||| || || |||| | | | | | | | | || | Sbjct 93711 GCGGACGACAACCTGAGTGACCTCGTGCAGCTGCTGGAAGTTGTAGCAGTTGTTGTCATA 93652 Query 118691 ATTGACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATC 118750 || ||| || || || || || || ||||| || || |||| | ||||||| | Sbjct 93651 ATCGACGTATGCCGGCAGAGCAATGGAAGCCAGGTTGCAGACAGCGACCTCATCCGGGGC 93592 Query 118751 AGTGTACTCTATAATTTCCGTGCACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTG 118810 | |||||| || || || ||||| | ||| || || |||||||||| |||||| || Sbjct 93591 CGAGTACTCGATGATCTCGGTGCAGAGGTTAGAGCTGCGGATGGTGCCCAGGTTCTTCTG 93532 Query 118811 ATTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTG 118870 || ||| ||| ||| ||||| ||||| | || | || ||||| || || Sbjct 93531 GTTGCTCTTCCGGTTTGCGTGATCTTTGTACAGCATAAAGGGGTTACCAGTCTCGGTCTG 93472 Query 118871 GGACTTGAGAATAGCCTTCCAGA-CATCGGCAGCTGGCACAGTGGCGTTGGCTCGC--CC 118927 | || || || || | ||| | | || | || ||||| | | | ||| || Sbjct 93471 AGCCTCAAGGATGGCATACCACAGCTTCTGGGCCTT---CAGTGTCTTACGGCCGCGGCC 93415 Query 118928 CTCTTCCTCGTACTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCC 118987 ||| | ||||||||| ||||||||| |||||||| ||||| | || | ||| || Sbjct 93414 CTCCTGCTCGTACTTCTCGTAGAGGGCCTCAAACTCCTCACCGTAGCAGTCGGCGAGGCC 93355 Query 118988 TGGTGCCTTATCTGGGCAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAA 119047 || || | ||||| | || | ||| | ||| || ||| |||||||||||||| Sbjct 93354 CGGGCACTCGTTGGGGCACATAAGGGTCCAGTCACCGTTCTTCTCGACCCGCTTCATGAA 93295 Query 119048 GAGGTCTGGGATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTG 119107 || || ||||||||||| || ||| || || ||| || || || | || || Sbjct 93294 CAGATCAGGGATCCAGAGAGCAAGGAAAAGGTCACGAGCTCGGATCTCCTCCTTACCGTG 93235 Query 119108 ATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGC 119167 || |||| || | || || | || ||| ||||||||||| || ||||| | || Sbjct 93234 GTTCTTCCGCAGGTCGAGGAACTCGAAGACATCAGCGTGCCACGGCTCGAGGTAAATAGC 93175 Query 119168 GATTGACCCCTTACG---ACGACCAGCCTGGTTTACATACCTCGCAGTGGCGTTAAATAC 119224 || | || ||| ||| |||||| ||||| | |||||| ||| || || Sbjct 93174 GAAGGCACCGGGACGCTTGTTGCCACCCTGGTCGACATAACGGGCAGTGTTGTTGAAGAC 93115 Query 119225 ACGAAGCATTGGAATGATACCATCGGATTGGCCATTTGT-CCCCCGA-ATACGAGACTTA 119282 || ||||| ||| |||| || | ||| || || || || ||| |||||| | Sbjct 93114 TCGCAGCATGGGAGTGATGCCGTTGGAGGTACCGTTGGTGCCAGCGATGTACGAGCC--G 93057 Query 119283 TTGGCTCTGACATCGTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCG 119342 |||| | || | ||||| || || || || || || ||| ||| ||||| || Sbjct 93056 GTGGCACGGATACGGTGGACGTTCAGGCCGATGCCTCCGGCCATCTTGGAGATCATGGCA 92997 Query 119343 CACTCCGTGAGACTGCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAG 119402 || | |||| || | ||||| || ||||| ||| |||| | ||| ||||||| Sbjct 92996 CATGTCTTGAGTGTGTCATAGATGCCCTCGATGCTGTCCTCCTTCATGTCGACGAGGAAG 92937 Query 119403 CAGCTCGACATTTGAGGCCTGGGTGTACCAGCGTTGAAGAGAGTTGGTGTCGCGTGGATG 119462 || |||| || ||| ||| || ||||| ||||| || || || | || ||| || Sbjct 92936 CAAGATGACAGCTGGGGCTGGGGAGTGCCAGCATTGAATAGTGTGGGCGAGGCATGGGTG 92877 Query 119463 AACATACCT-TGGGACATCTTGTCGTAGGTCTCCAAGAC 119500 || | || | | ||||| || ||||||||| | ||| Sbjct 92876 AAGA-ACTTGTTTGACATGAGGTTGTAGGTCTCGATGAC 92839 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618420736346760