Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaporthe_20aspalathi_20[genbank_20GCA_5F001447215.1_202015-11-20] 1,871 sequences; 55,029,878 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq1489 102 5e-17 >seq1489 Length=43664 Score = 102 bits (112), Expect = 5e-17 Identities = 161/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 ||||| | ||||||| |||||| || || || |||||| || ||||| || || || Sbjct 23346 CCGCCACGGAGACGCAGCACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCAGAG 23287 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 || || || ||||||| || ||||| || || || || | |||||| ||||| || || Sbjct 23286 AGGGTCCGGCCGTCTTCCAGCTGTTTGCCAGCGAAAATGAGACGCTGCTGGTCTGGTGGG 23227 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCAC 34658 | ||||||||||| ||| |||| || ||| | ||| ||||| |||||| Sbjct 23226 ATGCCCTCCTTGTC-CTGAATCTTTGACTTGACGTTGTCAATCGTGTCCGACGACTCCAC 23168 Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 || | || ||||| || || || | || || ||||| |||||||| Sbjct 23167 CTCGAGCGTGATCGTCTTCCCCGTCAGGGTCTTGACAAAGATCTGCAT 23120 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 314722423279943