Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaporthe_20aspalathi_20[genbank_20GCA_5F001447215.1_202015-11-20] 1,871 sequences; 55,029,878 total letters Query= NC_030394.2 Length=126965 Score E Sequences producing significant alignments: (Bits) Value seq709 123 2e-23 >seq709 Length=37314 Score = 123 bits (136), Expect = 2e-23 Identities = 144/192 (75%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 29624 GGCTCCCTCTCGAGCTGAATCCTCAGCGGTTCCACGTGGTCAAGGTAGACGTGAGCATCT 29683 ||||||||||| ||||| | || |||| || |||||||| ||||||||| || || Sbjct 18606 GGCTCCCTCTCCAGCTGCACCCGGAGCGCGTCGACGTGGTCCGCGTAGACGTGCGCGTCG 18547 Query 29684 CCCAGGGTGTG-GACAAACTCTCCCGGTTCTAGCCCGGTGACGTGAGCCATCATGTACGT 29742 |||| | ||| | | ||| ||||| | || || ||||| || ||||||| ||| Sbjct 18546 CCCATGACGTGCGTGAGGCTC-CCCGGGACGAGGTCGCACACGTGCGCGATCATGTGCGT 18488 Query 29743 GAGGAGAGAGTAGCTGGCGATGTTAAAGGGCACCCCGAGCCCCATGTCCCCTGACCTCTG 29802 || || ||||||||||||||||| || ||||| || || |||||||| | || | ||| Sbjct 18487 CAGCAGCGAGTAGCTGGCGATGTTGAACGGCACGCCCAGGCCCATGTCGCAGGAGCGCTG 18428 Query 29803 GTAGAGCTGGCA 29814 ||| |||||||| Sbjct 18427 GTACAGCTGGCA 18416 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406153938336706