Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaporthe_20aspalathi_20[genbank_20GCA_5F001447215.1_202015-11-20] 1,871 sequences; 55,029,878 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq1209 168 1e-36 >seq1209 Length=374226 Score = 168 bits (186), Expect = 1e-36 Identities = 391/589 (66%), Gaps = 8/589 (1%) Strand=Plus/Minus Query 76550 CCAGGACATTCATTCGGACACATCAATGACCACTCACCATCTTCCTTAACCCGTTTCATA 76609 || || || || || || ||||| | | ||| ||||| | | || ||||| ||||| Sbjct 93356 CCCGGGCACTCGTTGGGGCACATAAGGGTCCAGTCACCGTTCTTCTCGACCCGCTTCATG 93297 Query 76610 AAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTACGTTCTTCATTTCCT 76669 || |||||||| ||||| ||||||| || || || || | || || || || || Sbjct 93296 AACAGATCAGGGATCCAGAGAGCAAGGAAAAGGTCACGAGCTCGGATCTCCTCCTTACCG 93237 Query 76670 GTATTCTTTTTAAGATCTAGGAACTCCATAATATCAGAATGCCATGGTTCTAGATATATC 76729 ||||| || || |||||||| | | ||||| ||||| || || || || || Sbjct 93236 TGGTTCTTCCGCAGGTCGAGGAACTCGAAGACATCAGCGTGCCACGGCTCGAGGTAAATA 93177 Query 76730 GCCATAACACCCGGTCGTTTATTACCTCCCTGATCTATATATCTGGCAGTGTTATTATAA 76789 || | |||| || || || || || ||||| || | ||| | ||||||||| || | Sbjct 93176 GCGAAGGCACCGGGACGCTTGTTGCCACCCTGGTCGACATAACGGGCAGTGTTGTTGAAG 93117 Query 76790 ACTCTCAACATTGGAATAATGCCGTTAGATGTACCATTTGTTCCAGAAATATAACTTCCA 76849 |||| || ||| ||| | |||||||| || ||||| || || |||| || || || Sbjct 93116 ACTCGCAGCATGGGAGTGATGCCGTTGGAGGTACCGTTGGTGCCAGCGATGTACGAGCCG 93057 Query 76850 CATGCACGAATATTACTAATAGATAGGCCTATTCCTCCTGCCATTTTAGAGATTAGAGCA 76909 ||||| ||| | ||||| || ||||| ||||| || ||||| | ||| Sbjct 93056 GTGGCACGGATACGGTGGACGTTCAGGCCGATGCCTCCGGCCATCTTGGAGATCATGGCA 92997 Query 76910 CAGCGTTTCAATGTGTCATAGATGCCCTCTATACTATCATCCATCATGTTAAGAAGAAAA 76969 || || | |||||||||||||||||| || || || ||| |||||| | || || Sbjct 92996 CATGTCTTGAGTGTGTCATAGATGCCCTCGATGCTGTCCTCCTTCATGTCGACGAGGAAG 92937 Query 76970 CAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAACAATGTAGGAGATGCATGAGTG 77029 || |||| || | || ||| || ||||| || | ||| || || ||||| ||| Sbjct 92936 CAAGATGACAGCTGGGGCTGGGGAGTGCCAGCATTGAATAGTGTGGGCGAGGCATGGGTG 92877 Query 77030 AACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAACTGCTTCTATATC----CCATTG 77085 || | || | || | || ||||| || || || || || | ||| || | Sbjct 92876 AAGAACTTGTTTGACATGAGGTTGTAGGTCTCGATGACCCTCTCCACATCATCGCCCCAG 92817 Query 77086 ATGAATTCCTACAGCGACACGCATCAACATATGCTGAGGTCGTTCTACA 77134 ||| || || || |||||||| | ||| ||||| || || || ||| Sbjct 92816 ATG----CCAACTGCAACACGCATGATCATGTGCTGTGGCCGCTCGACA 92772 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712917726246720