Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaporthe_20helianthi_20[genbank_20GCA_5F001702395.1_202016-08-10] 13,382 sequences; 46,487,794 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq5359 210 3e-49 >seq5359 Length=3099 Score = 210 bits (232), Expect = 3e-49 Identities = 292/407 (72%), Gaps = 14/407 (3%) Strand=Plus/Minus Query 145866 CGCCACGTAGAACTGGCACAGGAGGTGGCAGGGCGGCAGGGCCATGGCGGGCAGGTCCGC 145925 || |||||| |||||| | | |||||| |||||||| ||||| |||||| || Sbjct 2631 CGACACGTAAAACTGGGCAAACATGTGGCACGGCGGCAGCGCCATCTTCTTCAGGTCGGC 2572 Query 145926 CGGGTTCCAGGCGGTGAGGACGAGCCTCCTGCTC-TCGGGGTTCCTCTTGATCTCCCCTA 145984 ||||||||| ||| | |||| || | || | || | ||||| || ||| || | Sbjct 2571 CGGGTTCCACGCGCTCAGGATGATGCGCC-GATCGTACGGGTTGTTCCTGAGCTTGTGGA 2513 Query 145985 TCAGGTCCCTGAGCTGGTCCACGCCCTGCCCCCGGTAATCTGTCTTGGAGTCCACGTACG 146044 | || |||||||| |||||||| ||| ||| || | | | | ||| |||||| Sbjct 2512 CAACCTCGGCCAGCTGGTCGACGCCCTGGCCCGTGTAGTCGGCCCTCGCGTCGACGTACT 2453 Query 146045 CGGCCCCGAAGTGCCTCCACTGGAACCCGTAGACGGGCCCCAGGTCCCCGGGCTCCCTGT 146104 |||| || ||||||| ||||||||||||||| ||||| |||||||| |||| ||| | || Sbjct 2452 CGGCGCCAAAGTGCCGCCACTGGAACCCGTACACGGGGCCCAGGTCGCCGGCCTCGCGGT 2393 Query 146105 GCCCCAGCCCGGCCCGGGCGAGGAAGTCCCGGGACCCGTTGGCGTCCCAGATCTTGACGC 146164 | |||||||| | | | ||||| | || || || |||||| |||||||||||||||||| Sbjct 2392 GGCCCAGCCCCACGCTGTCGAGGTACTCGCGAGAGCCGTTGCCGTCCCAGATCTTGACGC 2333 Query 146165 CCCTCGCGGAGAGCTCATTGGAGTCCGTGGAC------CCCCTGATGAACCAGAGCAGCT 146218 || | ||||| |||| || ||| ||| ||||||||| ||||||| Sbjct 2332 CCTGTTCCGAGAG------GGAGAGCGACGACGTCTCGCCCGAGATGAACCACAGCAGCT 2279 Query 146219 CTTCGAGGACCCCCCTCCAGAAGACCCTCTTGGTGGTCAGCAGGGGG 146265 | |||||||| || || |||||| | |||||| || || || ||| Sbjct 2278 CGGCGAGGACCGCCTTCTGGAAGACGCGCTTGGTTGTGAGGAGCGGG 2232 Score = 150 bits (166), Expect = 2e-31 Identities = 226/317 (71%), Gaps = 7/317 (2%) Strand=Plus/Minus Query 145540 ACCGCCATCTCCATGGGGATGGCCGCGTGGGGGTGGTAGCCCTCCAGCGCAAAGTCCTCC 145599 |||| ||| | ||| | || | | ||| |||| || |||| | | |||||||||| Sbjct 3044 ACCGACATTTTCATCGCAATCGTCTTGTGCGGGTTATACCCCTTAATCTCAAAGTCCTCG 2985 Query 145600 GCCCTGAAGTCATCTATGTCCTCCACCCGCCTCAGG----ATCCTGAGCCTGGGAAAGGG 145655 || | || | |||||| | || |||| ||| | ||| ||| ||| ||| Sbjct 2984 ACCTTCCAGCCGTCTATG-CTGCCGCCCGTCTCCCGCTTTATCTCCAGCTCGGGGAAGTC 2926 Query 145656 CCGGGGGCTCCTGGTCAGCTGGAGCTTCAGGGGCTCCACGTGGTTGAGGTAGACGTGCGC 145715 || || ||| |||||| | | |||| | || ||||||| | ||||||||| || Sbjct 2925 GCGCGGCTCCCTCTCCAGCTGCACCCTCAGCGCGTCGACGTGGTCGGCGTAGACGTGGGC 2866 Query 145716 GTCCCCCAGGACGTGGATGAAG-TCCCCGGGCTCGAGGCCCGTGAGGTGGGCGACCATGT 145774 ||| |||| |||||| | | | | |||||| ||||| | || ||| |||| ||||| Sbjct 2865 GTCGCCCATGACGTGCGTCAGGCTGCCCGGGA-CGAGGTCGCAGACGTGCGCGATCATGT 2807 Query 145775 AGGTCAGCAGGGAGTAGCTGGCTATGTTGAAGGGCACCCCCAGCCCCATGTCCCCCGAGC 145834 |||||||| ||||||||||| ||||||||||| || ||||| |||||||| | |||| Sbjct 2806 GCGTCAGCAGCGAGTAGCTGGCGATGTTGAAGGGGACGCCCAGGCCCATGTCGCAGGAGC 2747 Query 145835 GCTGGTACAGCTGGCAG 145851 |||| |||||||||||| Sbjct 2746 GCTGATACAGCTGGCAG 2730 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589978094903280