Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaporthe_20helianthi_20[genbank_20GCA_5F001702395.1_202016-08-10] 13,382 sequences; 46,487,794 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq12282 203 3e-47 seq4985 123 3e-23 seq11228 111 2e-19 seq13121 95.1 1e-14 >seq12282 Length=8984 Score = 203 bits (224), Expect = 3e-47 Identities = 283/394 (72%), Gaps = 2/394 (1%) Strand=Plus/Plus Query 116982 AGAAGGCCGAGTGGGCGCTGCGCTGGATCGCCGGCAGAGAGGCCGCCTTCGGCGAGCGCC 117041 |||||||||| ||||| ||| |||||| | | | ||| || ||| | | |||| | Sbjct 7567 AGAAGGCCGACTGGGCTCTGAAGTGGATCCAGGACCGCGAGTCCACCTATGCCCAGCGAC 7626 Query 117042 TGGTGGCCTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTT 117101 |||| |||||||| ||||| |||||| ||||||| ||| |||||| |||| || | Sbjct 7627 TGGTTGCCTTCGCTGCCGTGGAGGGCATCTTCTTCAGCGGCGCATTCGCCTCCATTTTCT 7686 Query 117102 GGCTCAAGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGG 117161 |||||||||| ||||| |||||||| |||||||| ||| ||||||||| || || | | Sbjct 7687 GGCTCAAGAAGCGCGGTCTCATGCCTGGCCTGACCTTCTCCAACGAGCTAATTTCTCGTG 7746 Query 117162 ACGAGGGTCTGCATTGCGACTTTGCCTGTTTGCTGTTCAAGCATTTGGTGCAGCGACCGA 117221 | ||||||||||| |||||| || ||| | |||||| || || | | || |||| Sbjct 7747 ATGAGGGTCTGCACACCGACTTCGCTTGTCTCCTGTTCTCTCACCTGAGGAATCGTCCGA 7806 Query 117222 GCGCGGCGCGCGTCAGGGAGATCGTCACCGACGCGGTCGCCATCGAGCAGCGCTTCCTCA 117281 || ||| || ||| ||| ||||||| || || ||||||||| || ||| | | Sbjct 7807 GCAAACAGCGTGTTGAGGATATCATCACCGAGGCTGTTGCCATCGAGAAGGAGTTCTTGA 7866 Query 117282 CCGAAGCGCTGCCGGTGCG-TCTGCTGGGACTCAATTGCGAAACGATGTCGCAATACATC 117340 |||| || ||||| |||| || || || | || | | | ||| || |||||| Sbjct 7867 CCGAGGCTCTGCC-ATGCGCCCTCCTCGGCATGAACTCCAACCTCATGAAACAGTACATC 7925 Query 117341 GAGTTCGTCGCCGACAGGCTGCTGCTCGAGCTGG 117374 ||||| || |||||| | || ||| ||| |||| Sbjct 7926 GAGTTTGTTGCCGACCGTCTACTGGTCGCTCTGG 7959 Score = 174 bits (192), Expect = 2e-38 Identities = 210/285 (74%), Gaps = 3/285 (1%) Strand=Plus/Plus Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695 || |||| |||||||| ||| || || ||||||||||| | |||||| | || || Sbjct 7160 ATCTGGCAGATGTACAAGAAGCATGAAGCTTCGTTCTGGACTGCTGAGGAGATTGATCTC 7219 Query 116696 TCCAAGGACACGAGCGACTGGG---AGCGCTTGAACGACAACGAGCGCCATTTCATCAAG 116752 |||||||||| | ||||||| | ||| ||| |||| ||||||| | |||||| Sbjct 7220 TCCAAGGACATGCACGACTGGAGCAACCGCCTGACCGACGACGAGCGATACTTCATCTCC 7279 Query 116753 CACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGT 116812 ||| | || ||||| ||||| || || || |||||||||||||| ||||| ||||| Sbjct 7280 CACATCCTCGCCTTCTTCGCTGCTTCGGATGGAATCGTCAACGAGAACCTGGTGGAGCGC 7339 Query 116813 TTCGCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCATG 116872 ||| ||||| ||| | | ||||| || ||||||||||| || |||||| ||| Sbjct 7340 TTCAGCGGCGAGGTTCAGATCCCAGAGGCTCGTTGCTTCTACGGATTCCAGATCATGATG 7399 Query 116873 GAGAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTAC 116917 |||||| | ||||| || | ||| ||| ||||||||||| ||| Sbjct 7400 GAGAACATCCACTCCGAGACGTACTCGCTGCTCATCGACACCTAC 7444 >seq4985 Length=7965 Score = 123 bits (136), Expect = 3e-23 Identities = 110/138 (80%), Gaps = 0/138 (0%) Strand=Plus/Minus Query 40783 GACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGAC 40842 ||||| || ||||| ||| | |||||||| || || |||| ||| ||||| ||||| || Sbjct 7945 GACAAGGAAGGCATTCCCCCAGACCAGCAGCGTCTGATCTTCGCCGGCAAGCAGCTCGAG 7886 Query 40843 GACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTG 40902 |||| ||||||||| |||||||||||||||||||||| |||| || || || ||| || Sbjct 7885 GACGGCCGCACCCTCTCCGACTACAACATCCAGAAGGAGTCCACCCTCCACCTGGTGCTG 7826 Query 40903 CGCTTGAGGGGCGGCGGC 40920 ||| || | || || ||| Sbjct 7825 CGCCTGCGTGGTGGTGGC 7808 >seq11228 Length=3802 Score = 111 bits (122), Expect = 2e-19 Identities = 164/230 (71%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || || || || || | ||||| || || ||||| | || ||||| | | Sbjct 147 ATGCAGATCTTTGTCAAGACCTTGACGGGAAAGACGATCACTCTTGAAGTCGAGTCATCA 206 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | |||| ||||| || |||| ||||| ||||||||||| | ||||| Sbjct 207 GACACAATCGACAACG-TCAAGTCTAAGATTCAGGACAAGGAGGGCATCCCACCAGACCA 265 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 |||||| || || | ||| ||||| ||| |||| || | || || || |||||||| Sbjct 266 GCAACGTCTTATTTTCGCTGGCAAGCAGTTGGAAGATGGCCGGACACTGTCTGACTACAA 325 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGCG 40918 |||||| |||||| | |||||||| | ||| | || || |||| |||| Sbjct 326 CATCCAAAAGGAGTCGACGCTGCACTTGGTGCTTCGTCTGCGGGGTGGCG 375 >seq13121 Length=2348 Score = 95.1 bits (104), Expect = 1e-14 Identities = 79/97 (81%), Gaps = 0/97 (0%) Strand=Plus/Plus Query 40783 GACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGAC 40842 ||||| |||||||| ||| | |||||||| ||| | |||| ||| ||||| ||||| || Sbjct 9 GACAAGGAGGGCATTCCCCCAGACCAGCAGCGATTGATCTTCGCCGGCAAGCAGCTTGAG 68 Query 40843 GACGAGCGCACCCTCAACGACTACAACATCCAGAAGG 40879 || | || |||||| |||||||||||||||||||| Sbjct 69 GATGGCCGTACCCTCTCCGACTACAACATCCAGAAGG 105 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515133016708320