Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaporthe_20helianthi_20[genbank_20GCA_5F001702395.1_202016-08-10] 13,382 sequences; 46,487,794 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq7991 262 4e-65 seq12282 149 6e-31 seq11228 109 5e-19 >seq7991 Length=9451 Score = 262 bits (290), Expect = 4e-65 Identities = 582/864 (67%), Gaps = 8/864 (1%) Strand=Plus/Plus Query 23021 GCGATCGAGGCAAGATTGCATACGGCCACCTCGTCTT-TGGACGTGTACTCTACAATTTC 23079 || || ||||| | ||||| ||||| |||||||| || || |||||| | || || Sbjct 2081 GCAATGGAGGCCAAGTTGCACACGGCGACCTCGTCCGGTGCACA-GTACTCGATGATCTC 2139 Query 23080 GGTACATAGATTGCTACACTTTATCGTGCCCAAATTGCTCTGGTTGCTTTTTCGATT-GC 23138 || || || ||| | || || |||| || |||||||||| || || || || Sbjct 2140 TGTGCAGAGGTTGGAGCTTCGAATGGTACCCAGGTTCTTCTGGTTGCTCTTGCGGTTTGC 2199 Query 23139 ACGAATCCTTGTAGAGCATGTACGGCGTGCCCGTCTCGACCTGCGACTCGATGATCGCTC 23198 | ||||| || |||||| | || |||| |||||| ||| | |||| || || Sbjct 2200 GTGG-TCCTTATACAGCATGAAGGGGTTGCCAGTCTCGGTCTGAGCTTCGAGAATAGCAT 2258 Query 23199 GCCACATAGTCTGAGCGTGAACACGTCGCACGTACCT--GCCTTCTTCCTCGTACTTTTG 23256 ||||| |||| || | | ||| || |||| ||| || | |||||||| | Sbjct 2259 ACCACAGCTTCTGGGCCTTCATG-GTCTTGCG-ACCTCGGCCCTCCTTCTCGTACTGCTC 2316 Query 23257 GTACAACGCGTCAAATTCGGCACCGTAACAGTCGGCCAGGCCGGGCGATTGCATCGGACA 23316 ||| | || || || || | ||||| |||||||| ||||| || | | | ||||| Sbjct 2317 GTAGAGAGCCTCGAACTCATCGCCGTAGCAGTCGGCGAGGCCAGGACACTCGTTAGGACA 2376 Query 23317 CATGAGACTCCACATTGAGTCATTTTCAACGCGTCTCATAAAAAGATCCGGTATCCATAG 23376 ||| || |||| || || || || || |||| |||||||| || ||||| || Sbjct 2377 CATCAGGGTCCAGTCACCGTTCTTCTCGACCCGCTTCATGAAAAGATCGGGGATCCAGAG 2436 Query 23377 AGCGTAGAACAGTTCGCGGGCGCGCACCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAA 23436 || ||| || || ||||| || | |||||| |||||| |||||| || || | Sbjct 2437 GGCAAGGAAAAGATCACGGGCTCGGATCTCCTCCTTGCCGTGGTTCTTGCGCAGGTCAAG 2496 Query 23437 AAAGTCCAACACGTCCGCATGCCACGGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTT 23496 || || || || || || ||||| ||||| ||||| | ||||| || || || | ||| Sbjct 2497 GAACTCAAAGACATCAGCGTGCCATGGCTCAAGGTAGATAGCAAAAGCACCAGGACGCTT 2556 Query 23497 ATTGCCGCCCTGATCGACGTAACGGGCCGTGTTGTTGTACACTCTTAGCATCGGCACGAG 23556 ||||||||||||||||||||| ||||| ||||||||| | || | ||||| || || Sbjct 2557 ATTGCCGCCCTGATCGACGTATCGGGCGGTGTTGTTGAAGACCCGCAGCATTGGTGTGAT 2616 Query 23557 ACCGTTGGACGCGCCGCCTACGCCCGCCACACTCGAACCTTTTGCTCGAACGTTGTGAAC 23616 || || || | |||| ||| || | || || | || || | | ||| || Sbjct 2617 GCCATTAGATGTGCCGTTAGTGCCAGCGATGTATGAGCCGGTGGCACGGATGCGGTGCAC 2676 Query 23617 GTGGAAACCTATGCCTCCGCCCGATTTCGATATCATCGCGCATTGTTTCAGAGTGTCGTA 23676 || | ||| || || || || || || ||||| || || || || |||||||| Sbjct 2677 GTTCAGACCGATACCACCCGCCATCTTGGAGATCATAGCACAAGTCTTGAGGGTGTCGTA 2736 Query 23677 GATGCCCTCGATGCTGTCCTCTTTGGTCGCGACCAAGAAACACGAAGACATTTGCGCTTT 23736 |||||||||||||||||||| || | |||| | ||| || || |||| || | | Sbjct 2737 AATGCCCTCGATGCTGTCCTCCTTCATGTCGACAAGGAAGCATGATGACAACTGGGGCTG 2796 Query 23737 GGGCGTAGCGGCCGAGAACAGTGTCGGGCTGGCGTGCGTAAAGTATCCATTCGACATTAG 23796 ||||| | || ||||| || || ||| || || ||| | ||| ||||| || Sbjct 2797 AGGCGTGCCAGCATTGAACAAAGTGGGCGAGGCATGTGTGAAGAACTTATTTGACATCAG 2856 Query 23797 ATTGTACGTGTCGATGGCGGCATCAATGTCCTCTCCGTGTATACCGATGGCGACGCGCAT 23856 ||||| || |||||| | || | || ||||| ||||||| ||||| ||||| Sbjct 2857 GTTGTAGGTCTCGATGACCCTCTCGACATCGTCTCCCCAGATACCGACAGCGACACGCAT 2916 Query 23857 CATCATGTATTGAGGTCTCTCGAC 23880 ||||||| ||| |||| ||| || Sbjct 2917 GATCATGTGTTGTGGTCGCTCAAC 2940 Score = 105 bits (116), Expect = 6e-18 Identities = 318/481 (66%), Gaps = 19/481 (4%) Strand=Plus/Plus Query 22247 GACTGACTCTGATCGATAAACGCTCCTCGATCGGCGGCCATATTTATCAATG-TACGCAT 22305 |||||| ||| || ||||| || || || || || | ||| | | ||||| | | | Sbjct 1307 GACTGAGACTGGTCAATAAAGGCACCACGGTCAGCAGACATCTGCA-CAATGGTCCTCTG 1365 Query 22306 CGACATTTCCCATACGGTCTTGTACAGTTGCCTGATCTCTAACGGTATCGATTCG-ATCC 22364 || || ||||| ||||||||||| || | |||| || ||| || | | | || | Sbjct 1366 AGAGATCTCCCAGACGGTCTTGTAAAGGGCCTTGATATCAGCCGGGAT-GCTGGGAATGC 1424 Query 22365 TCTGGACGGACCCGTTATTGTGTATGATCAAATTTTTAATCGTATCGTTCCACAAACCGA 22424 |||||| ||| || | | | || || || || || | || |||||| || | Sbjct 1425 TCTGGATGGAACCATCCTCGGCGATAATACGGTTCTTCATGGCCTCAGACCACAAGCCAA 1484 Query 22425 TGGCGGTCAAATCTTTGACCAGATGACGGTTCACCACTTGAAACTCGCCGGACAAGACGC 22484 | |||| ||| ||| || |||| || || || |||||||| | | || | Sbjct 1485 GCTCTGTCAGATCCCTGAGAAGCCACGGGTTGACGACCTGGAACTCGCCAGCGAGCACAC 1544 Query 22485 GGCGTTGGTAAATGTTGGATGTGAACGGTTCGAAAGATTCATTGTTTCCCAGTATCTGAG 22544 | || ||||| |||||||| ||| | || ||||| | |||||||| ||||| ||||| | Sbjct 1545 GTCGCTGGTAGATGTTGGAGGTGTATGGCTCGAAGCACTCATTGTTACCCAGGATCTGCG 1604 Query 22545 CGGTCGAAGCGGTCGGCATCGGCGCCAACAGTAGCGAGTTTC-TCAAGCCGT-GCTTTGA 22602 |||||||| || ||||| || |||| || | ||| | | | | || | |||| Sbjct 1605 ACGTCGAAGCAGTGGGCATTGGTGCCAGCAACAAACTGTTGCGTACACCAGTCTCCTTGA 1664 Query 22603 AATTTTACTCTTGAGCATCGACCAGTCCCACAGATCGGACGGCGTCACATTGTCCCACAT 22662 || | || | ||||| ||||||||| || ||||| ||| | ||||| |||||| Sbjct 1665 TCTTGTCCTTGAGCGCATC--CCAGTCCCAAAGGTCGGAAGGCTTGACATT---CCACAT 1719 Query 22663 ATCGTATTGCAACACGCC----GCGACTCGCCGGGCTGCCTTCGTACGTTTCGTACGGAC 22718 || | |||| | ||| | |||| |||||||| ||||| || | ||| || | Sbjct 1720 GTCAAACTGCAGGATGCCCTGTGAGACT----GGGCTGCCCTCGTATGTCTTGTATGGGC 1775 Query 22719 C 22719 | Sbjct 1776 C 1776 >seq12282 Length=8984 Score = 149 bits (164), Expect = 6e-31 Identities = 330/486 (68%), Gaps = 12/486 (2%) Strand=Plus/Plus Query 57914 CAAGAAGGCAGAGTGGTCAATCAAATGGATAAAA-AGCGCCACGGCCACGTTCGCCGAGA 57972 ||||||||| || ||| | | || ||||| | | ||| | | |||| | ||| || Sbjct 7565 CAAGAAGGCCGACTGGGCTCTGAAGTGGATCCAGGACCGCGA-GTCCACCTATGCCCAGC 7623 Query 57973 GGCTAATCGCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTTGCGGCAATAT 58032 | || | || ||||| ||||| || || || ||||| ||| || || | || | Sbjct 7624 GACTGGTTGCCTTCGCTGCCGTGGAGGGCATCTTCTTCAGCGGCGCATTCGCCTCCATTT 7683 Query 58033 TTTGGATGAAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGC 58092 | ||| | ||||| ||||| || ||||| |||||||| || ||||||| | || || | Sbjct 7684 TCTGGCTCAAGAAGCGCGGTCTCATGCCTGGCCTGACCTTCTCCAACGAGCTAATTTCTC 7743 Query 58093 GCGACGAGGGTCTCCATACTGATTTTGCGTGCCTAATGTACTCTCACATTGTCAATAAAC 58152 | || |||||||| || || || || || || || ||| ||||||| | ||| | Sbjct 7744 GTGATGAGGGTCTGCACACCGACTTCGCTTGTCTCCTGTTCTCTCACCTGAGGAATCGTC 7803 Query 58153 CGACGCGGGATCGCATCTTG--GACATTATCACCGAGGCGGTCGCGATCGAAAATGAGTT 58210 ||| || | || | ||| || || ||||||||||| || || ||||| || ||||| Sbjct 7804 CGA-GCAA-ACAGCGTGTTGAGGATATCATCACCGAGGCTGTTGCCATCGAGAAGGAGTT 7861 Query 58211 TGTCACCGAAGCCCTACCGGTGGCCATGCTCGGTATGAACAATGATTTGATGTCAAAGTA 58270 | ||||| || || || ||| | ||||| |||||| | | ||| | |||| Sbjct 7862 CTTGACCGAGGCTCTGCCATGCGCCCTCCTCGGCATGAACTCCAACCTCATGAAACAGTA 7921 Query 58271 CATTGAGTTTGTTGCCGACAGACTTTTGCTCGAACTG---ATTGGAGAGCGTCATTACAA 58327 ||| ||||||||||||||| | || || ||| ||| | | |||| || |||||| Sbjct 7922 CATCGAGTTTGTTGCCGACCGTCTACTGGTCGCTCTGGGCAAT-GAGAAGGT--TTACAA 7978 Query 58328 CACGAAAAATCCGTTTGATTTTATGAATCTGATCTCGCTCGAGGGCAAGACAAACTTTTT 58387 | ||| || || || || ||| | ||||| |||| |||||||| ||||| || Sbjct 7979 GTCATCAAACCCCTTCGACTTCATGGAGAACATCTCTCTCGGTGGCAAGACCAACTTCTT 8038 Query 58388 CGAAAA 58393 || || Sbjct 8039 TGAGAA 8044 >seq11228 Length=3802 Score = 109 bits (120), Expect = 5e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| || || || ||||| |||| || || |||||||| | || || || | || Sbjct 146 CATGCAGATCTTTGTCAAGACCTTGACGGGAAAGACGATCACTCTTGAAGTCGAGTCATC 205 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 |||| |||| | ||||| | || ||||||||| ||| | || || ||||| Sbjct 206 AGACACAATCGACAACGTCAAGTCTAAGATTCAGGACAAGGAGGGCATCCCACCAGACCA 265 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 ||| ||||| || ||||||||||| ||||||||||| ||| || || || || Sbjct 266 GCAACGTCTTATTTTCGCTGGCAAGCAGTTGGAAGATGGCCGGACACTGTCTGACTACAA 325 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419 ||| ||||| || ||||| || || |||| ||| | ||| |||| || Sbjct 326 CATCCAAAAGGAGTCGACGCTGCACTTGGTGCTTCGTCTGCGGGGTGG 373 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445691834425440