Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaporthe_20helianthi_20[genbank_20GCA_5F001702395.1_202016-08-10] 13,382 sequences; 46,487,794 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq12282 140 4e-28 >seq12282 Length=8984 Score = 140 bits (154), Expect = 4e-28 Identities = 162/218 (74%), Gaps = 3/218 (1%) Strand=Plus/Minus Query 33573 AACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAA 33632 |||| | ||| ||||| ||| |||||||||||| || | | ||||| ||||| || Sbjct 7783 AACAGGAGACAAGCGAAGTCGGTGTGCAGACCCTCATCACGAGAAATTAGCTCGTTGGAG 7724 Query 33633 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCG 33692 || || || || ||||| || || ||||| || ||||| || ||||| ||||||| ||| Sbjct 7723 AAGGTCAGGCCAGGCATGAGACCGCGCTTCTTGAGCCAGAAAATGGAGGCGAATGCGCCG 7664 Query 33693 GAAAAGAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGG---CG 33749 |||||||| || || || ||||| ||||||| |||| || |||| || || Sbjct 7663 CTGAAGAAGATGCCCTCCACGGCAGCGAAGGCAACCAGTCGCTGGGCATAGGTGGACTCG 7604 Query 33750 CTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTT 33787 | ||| || |||||||| ||||||| ||||||||||| Sbjct 7603 CGGTCCTGGATCCACTTCAGAGCCCAGTCGGCCTTCTT 7566 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 629712247260960