Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaporthe_20helianthi_20[genbank_20GCA_5F001702395.1_202016-08-10] 13,382 sequences; 46,487,794 total letters Query= NC_003401.1 Length=133719 Score E Sequences producing significant alignments: (Bits) Value seq5359 123 2e-23 >seq5359 Length=3099 Score = 123 bits (136), Expect = 2e-23 Identities = 159/217 (73%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 20877 ATCTTCAGC-CGCGGAAACGGACGCGGGGTCCTCCGCAGCTGAAGCAGCAGGGGATCAAC 20935 |||| |||| || |||| | ||||| |||| |||||| | | ||| | || || Sbjct 2945 ATCTCCAGCTCGGGGAAGTCG-CGCGGCTCCCTCTCCAGCTGCACCCTCAGCGCGTCGAC 2887 Query 20936 GTGGTTGTTGTAAACGTGGGCGTCACCCAAGGTGTGCACAAAGTCTCCCGGGGTCAGGCC 20995 ||||| | ||| ||||||||||| |||| | |||| | | |||||| ||| | Sbjct 2886 GTGGTCGGCGTAGACGTGGGCGTCGCCCATGACGTGCGTCAGGCTGCCCGGGACGAGGTC 2827 Query 20996 CGTGACGTGAGCGATCAGATACGTCAGGAGGGCGTAGCTGGCGATGTTAAACGGGACCCC 21055 |||||| ||||||| | |||||| || | ||||||||||||||| || ||||| || Sbjct 2826 GCAGACGTGCGCGATCATGTGCGTCAGCAGCGAGTAGCTGGCGATGTTGAAGGGGACGCC 2767 Query 21056 GAGGCCCATGTCGGCGGACCTCTGGTACAGCTGGCAG 21092 |||||||||||| ||| | ||| |||||||||||| Sbjct 2766 CAGGCCCATGTCGCAGGAGCGCTGATACAGCTGGCAG 2730 Score = 114 bits (126), Expect = 1e-20 Identities = 210/304 (69%), Gaps = 14/304 (5%) Strand=Plus/Minus Query 21110 CACGTAAAACTGACACAAAACGTGACAAGGAGGGAGAGCCATCCGCGCGAGGTCCGCGGG 21169 |||||||||||| || | ||| || || || || |||||| | ||||| || || Sbjct 2628 CACGTAAAACTGGGCAAACATGTGGCACGGCGGCAGCGCCATCTTCTTCAGGTCGGCCGG 2569 Query 21170 GTTCCACGCGCACATAACGATGCGCCGATCGTGGGGCCGCCTGTTAATTAGATCC---AC 21226 ||||||||||| || | |||||||||||||| || |||| | || | || Sbjct 2568 GTTCCACGCGCTCAGGATGATGCGCCGATCGTACGGGT---TGTTCCTGAGCTTGTGGAC 2512 Query 21227 CACGTAACGCAGCTGGTCCACCCCCTGACCCTCGTAGTTGGCGTCGGCCCCCCTGTACTC 21286 || | ||||||||| || ||||| ||| ||||| ||| || | |||||| Sbjct 2511 AACCTCGGCCAGCTGGTCGACGCCCTGGCCCGTGTAGTCGGCCCTCGCGTCGACGTACTC 2452 Query 21287 CGCCCCAAAATGTCTCCACTGGAACCCGTACACCGGCCCCAGATCGC---CCTCGCGGCG 21343 || ||||| || | |||||||||||||||||| || ||||| |||| |||||||| | Sbjct 2451 GGCGCCAAAGTGCCGCCACTGGAACCCGTACACGGGGCCCAGGTCGCCGGCCTCGCGGTG 2392 Query 21344 GTCCCCGAAGCCCTGCGCCG-CCAAAAAGGCGCGGGACCCGTGCGCGTCCCAAATTTTTA 21402 | || ||||| ||| | | | | |||| || |||| ||||||| || || | Sbjct 2391 GCCC----AGCCCCACGCTGTCGAGGTACTCGCGAGAGCCGTTGCCGTCCCAGATCTTGA 2336 Query 21403 CGCC 21406 |||| Sbjct 2335 CGCC 2332 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427706232675360