Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaporthe_20helianthi_20[genbank_20GCA_5F001702395.1_202016-08-10] 13,382 sequences; 46,487,794 total letters Query= NC_003529.1 Length=155060 Score E Sequences producing significant alignments: (Bits) Value seq11228 86.0 6e-12 >seq11228 Length=3802 Score = 86.0 bits (94), Expect = 6e-12 Identities = 158/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 139537 GCCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCT 139596 ||| || || | ||| | || ||||| | ||| ||||| ||||| ||||| || || Sbjct 374 GCCACCCCGCAGACGAAGCACCAAGTGCAGCGTCGACTCCTTTTGGATGTTGTAGTCAGA 315 Query 139597 CATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 139656 || ||| | ||||| | ||| || ||||| | || ||||||||||| || || || Sbjct 314 CAGTGTCCGGCCATCTTCCAACTGCTTGCCAGCGAAAATAAGACGTTGCTGGTCTGGTGG 255 Query 139657 TATGCCTTCTTTGTCGGTGATTTTTTG-TTTTAGCTGTTCCACTGTGTCGGTGGGCTCCA 139715 ||||| || ||||| ||| | || | || | | || | |||||| | | ||| | Sbjct 254 GATGCCCTCCTTGTC-CTGAATCTTAGACTTGACGTTGTCGATTGTGTCTGATGACTCGA 196 Query 139716 CCTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 | |||| || | |||||| || ||||| || || || || || ||||| Sbjct 195 CTTCAAGAGTGATCGTCTTTCCCGTCAAGGTCTTGACAAAGATCTGCAT 147 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 495981020894400