Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaporthe_20helianthi_20[genbank_20GCA_5F001702395.1_202016-08-10] 13,382 sequences; 46,487,794 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq7991 154 2e-32 seq12282 143 4e-29 >seq7991 Length=9451 Score = 154 bits (170), Expect = 2e-32 Identities = 387/586 (66%), Gaps = 4/586 (1%) Strand=Plus/Plus Query 79891 CCAGGACATTCGTCAGGACACATCAACGACCACTCTCCATCATCCTTTACTCGTTTCATA 79950 |||||||| |||| ||||||||||| | ||| || || | | || || || ||||| Sbjct 2357 CCAGGACACTCGTTAGGACACATCAGGGTCCAGTCACCGTTCTTCTCGACCCGCTTCATG 2416 Query 79951 AAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCT 80010 || ||||| || ||||| || || | || ||||| | || || |||||| || || Sbjct 2417 AAAAGATCGGGGATCCAGAGGGCAAGGAAAAGATCACGGGCTCGGATCTCCTCCTTGCCG 2476 Query 80011 GTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATG 80070 ||||| || || |||||| | | | ||||| ||||| || || | ||| || Sbjct 2477 TGGTTCTTGCGCAGGTCAAGGAACTCAAAGACATCAGCGTGCCATGGCTCAAGGTAGATA 2536 Query 80071 GCCATAACTCCCGGTCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAA 80130 || | | | || || || || || || |||||||| | ||||| |||||||| || | Sbjct 2537 GCAAAAGCACCAGGACGCTTATTGCCGCCCTGATCGACGTATCGGGCGGTGTTGTTGAAG 2596 Query 80131 ACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCA 80190 || | || |||||| | || ||||| ||||| || || || || | ||| || || Sbjct 2597 ACCCGCAGCATTGGTGTGATGCCATTAGATGTGCCGTTAGTGCCAGCGATGTATGAGCCG 2656 Query 80191 CTGGCACGAAT--ATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATG 80248 ||||||| || | | || ||||| || || || ||||| || ||||| | | Sbjct 2657 GTGGCACGGATGCGGTGCACGTT--CAGACCGATACCACCCGCCATCTTGGAGATCATAG 2714 Query 80249 CGCATCGTTTTAACGTATCATAGATGCCCTCTATGCTATCATCAATCATGTTAAGTAGAA 80308 | || || | || || || |||||||| ||||| || || |||||| | || | Sbjct 2715 CACAAGTCTTGAGGGTGTCGTAAATGCCCTCGATGCTGTCCTCCTTCATGTCGACAAGGA 2774 Query 80309 AACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCG 80368 | || |||| ||| | || || || ||||| || || || || || || || | Sbjct 2775 AGCATGATGACAACTGGGGCTGAGGCGTGCCAGCATTGAACAAAGTGGGCGAGGCATGTG 2834 Query 80369 TAAACCATTTTTCAGACAGTAGATTGTACGTCTCAATAGCTGATTCTATATCCCATTGAT 80428 | || | || | |||| || ||||| ||||| || | || | ||| | Sbjct 2835 TGAAGAACTTATTTGACATCAGGTTGTAGGTCTCGATGACCCTCTCGACATCGTCTCCCC 2894 Query 80429 GAATTCCTACCGCGACACGCATTAACATGTGCTGAGGTCTTTCAAC 80474 || || || ||||||||||| | |||||| || |||| ||||| Sbjct 2895 AGATACCGACAGCGACACGCATGATCATGTGTTGTGGTCGCTCAAC 2940 >seq12282 Length=8984 Score = 143 bits (158), Expect = 4e-29 Identities = 163/218 (75%), Gaps = 3/218 (1%) Strand=Plus/Minus Query 49951 AACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAA 50010 |||| | ||| ||||| ||| |||||||||||| || | | |||||| |||||||| Sbjct 7783 AACAGGAGACAAGCGAAGTCGGTGTGCAGACCCTCATCACGAGAAATTAGCTCGTTGGAG 7724 Query 50011 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCA 50070 || || || || ||||| || || ||||| || ||||| || ||||| || |||| || Sbjct 7723 AAGGTCAGGCCAGGCATGAGACCGCGCTTCTTGAGCCAGAAAATGGAGGCGAATGCGCCG 7664 Query 50071 GAAAAGAAGATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGG---CG 50127 |||||||| || || || || || |||||||| |||| || |||| ||| || Sbjct 7663 CTGAAGAAGATGCCCTCCACGGCAGCGAAGGCAACCAGTCGCTGGGCATAGGTGGACTCG 7604 Query 50128 CTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTT 50165 | ||| || |||||||| ||||||| ||||||||||| Sbjct 7603 CGGTCCTGGATCCACTTCAGAGCCCAGTCGGCCTTCTT 7566 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718148651586480