Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaporthe_20helianthi_20[genbank_20GCA_5F001702395.1_202016-08-10] 13,382 sequences; 46,487,794 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq7991 156 6e-33 seq12282 134 2e-26 >seq7991 Length=9451 Score = 156 bits (172), Expect = 6e-33 Identities = 323/476 (68%), Gaps = 10/476 (2%) Strand=Plus/Minus Query 96864 CGATACGTTACACAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCT 96923 |||||||| |||||||||||||| || || || ||| | || ||||| | || || Sbjct 2580 CGATACGTCGATCAGGGCGGCAATAAGCGTCCTGGTGCTTTTGCTATCTACCTTGAGCCA 2521 Query 96924 TGGCACGCGGACGTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCA 96983 |||||||| || || ||||| || | || ||||||| ||| ||| || ||| Sbjct 2520 TGGCACGCTGATGTCTTTGAGTTCCTTGACCTGCGCAAGAACCACGGCAAGGAGGAGATC 2461 Query 96984 CGAGCCAGGGACTTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTC--- 97040 |||||| | || | || ||| |||||| | || ||| | ||||||||||| ||| Sbjct 2460 CGAGCCCGTGATCTTTTCCTTGCCCTCTGGATCCCCGATCTTTTCATGAAGCGGGTCGAG 2401 Query 97041 AACGACGGTGGCTACTGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGC 97100 || |||||| |||||| ||| ||||| || || || || || || |||| ||| Sbjct 2400 AAGAACGGTG---ACTGGACCCTGATGTGTCCTAACGAGTGTCCTGGCCTCGCCGACTGC 2344 Query 97101 TGGGGCGAAGAGTTTGAGGCCAAGTACACGGCCTACGAGCAAGAGGGCCGA-TACGTGAG 97159 | ||||| ||||| ||||| ||| | |||||| | ||||||||| || || Sbjct 2343 TACGGCGATGAGTTCGAGGCTCTCTACGAGCAGTACGAGAAGGAGGGCCGAGGTCGCAAG 2284 Query 97160 ACGAGTCGATGCACGAGAA-CTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACTGGAA 97218 || | || | | |||| |||||| | || || | |||||| |||||||| | Sbjct 2283 ACCA--TGAAGGCCCAGAAGCTGTGGTATGCTATTCTCGAAGCTCAGACCGAGACTGGCA 2226 Query 97219 CTCCGTACATTCTCTACAAGGATACCGTGAATCGCAACAGCAACCAACGCCACTTGGGCA 97278 || | ||| || || ||||| || || ||||| |||||||| || |||| | Sbjct 2225 ACCCCTTCATGCTGTATAAGGACCACGCAAACCGCAAGAGCAACCAGAAGAACCTGGGTA 2166 Query 97279 CCATCAAGGGCTCCAATCTGTGCACGGAAATTGTAGAGTACGCCTCTCCGGACGAG 97334 |||| ||||||| || ||||| || || | |||||| | ||||||||| Sbjct 2165 CCATTCGAAGCTCCAACCTCTGCACAGAGATCATCGAGTACTGTGCACCGGACGAG 2110 >seq12282 Length=8984 Score = 134 bits (148), Expect = 2e-26 Identities = 204/288 (71%), Gaps = 2/288 (1%) Strand=Plus/Plus Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078 || ||| | |||||||| ||| | | || || || ||||| | || ||| | ||||| Sbjct 7160 ATCTGGCAGATGTACAAGAAGCATGAAGCTTCGTTCTGGACTGCTGAGGAGATTGATCTC 7219 Query 125079 TCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAGTTTATATCG 125138 ||||||||| || |||| ||| | || |||| || |||||| | || || || Sbjct 7220 TCCAAGGACATGCACGACTGGAGCAACCGCCTGACCGACGACGAGCGATACTTCATCTCC 7279 Query 125139 CACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCTGTTGACACGA 125198 ||||| | |||||||| || | || ||||||||||||||||| || ||| || || Sbjct 7280 CACATCCTCGCCTTCTTCGCTGCTTCGGATGGAATCGTCAACGAGAACCTGGTGGAGCGC 7339 Query 125199 TTCTCTCAAGAGTTGACCATTCCAGAGGTGTCG-TGCTTTTACGGATTCCAAATCATGAT 125257 ||| ||| | || ||||||| ||| ||||| ||||||||||| |||||||| Sbjct 7340 TTCAGCGGCGAGGTTCAGATCCCAGAGG-CTCGTTGCTTCTACGGATTCCAGATCATGAT 7398 Query 125258 TGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACAT 125305 |||||| | ||||| || | |||||| || || |||| ||||| Sbjct 7399 GGAGAACATCCACTCCGAGACGTACTCGCTGCTCATCGACACCTACAT 7446 Score = 132 bits (146), Expect = 7e-26 Identities = 318/475 (67%), Gaps = 27/475 (6%) Strand=Plus/Plus Query 125390 GTGGATCGATGACGACAAGTCTTCGTACGCCGACAGACTGGTGGCATTCGCCGCCGTAGA 125449 ||||||| | ||| | |||| | || ||| | ||||||| || ||||| ||||| || Sbjct 7589 GTGGATCCAGGACCGCGAGTCCACCTATGCCCAGCGACTGGTTGCCTTCGCTGCCGTGGA 7648 Query 125450 GGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTTTGGCTCAAGAAGCGCGGACTCAT 125509 |||||||||||| || || || |||| || ||||||||||||||||| ||||| Sbjct 7649 GGGCATCTTCTTCAGCGGCGCATTCGCCTCCATTTTCTGGCTCAAGAAGCGCGGTCTCAT 7708 Query 125510 GCCCGGACTGACGCACAGTAACGAGTTTATATCTCGAGACGAGGGCCTACACTGTGACTT 125569 ||| || ||||| | |||||| | || ||||| || ||||| || ||| ||||| Sbjct 7709 GCCTGGCCTGACCTTCTCCAACGAGCTAATTTCTCGTGATGAGGGTCTGCACACCGACTT 7768 Query 125570 TGCCATTCTACTGTT-TCGCAACT-----ATCTGCGTCCCGAGTGCAGATCCAGCGATGA 125623 || ||| ||||| || || || || ||||| | ||| | ||||| || Sbjct 7769 CGCTTGTCTCCTGTTCTCTCACCTGAGGAAT---CGTCC---GAGCAAA--CAGCG-TGT 7819 Query 125624 AAAGGTCATCAACATTGTAACCGATGCCGTGAGGATAGAACAAGAGTTTCTAACCGAATC 125683 ||| |||| | ||||| || || || || | ||||| | ||||| | Sbjct 7820 TGAGGATATCA------TCACCGAGGCTGTTGCCATCGAGAAGGAGTTCTTGACCGAGGC 7873 Query 125684 CCTACCGGTCAGCATGATTGGCATGAACTGCAAGCTAATGTGCGAGTACATAGAGTTTGT 125743 || || | | | | |||||||||| ||| || ||| ||||||| |||||||| Sbjct 7874 TCTGCCATGCGCCCTCCTCGGCATGAACTCCAACCTCATGAAACAGTACATCGAGTTTGT 7933 Query 125744 GGCAGATCGTCTACTGTACGAGTTGATTGGC---CGCAAGATTTACAACGCCAAGAATCC 125800 || || ||||||||| || || ||| ||| ||||||| | || || Sbjct 7934 TGCCGACCGTCTACTGGTCGCTCTG---GGCAATGAGAAGGTTTACAAGTCATCAAACCC 7990 Query 125801 CTTTGATTTCATGACCAGCATATCACTAGAGGGTAAGACCAACTTTTTCGAGAAG 125855 ||| || |||||| | ||| || || | || ||||||||||| || |||||| Sbjct 7991 CTTCGACTTCATGGAGAACATCTCTCTCGGTGGCAAGACCAACTTCTTTGAGAAG 8045 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 740935239322320