Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaporthe_20helianthi_20[genbank_20GCA_5F001702395.1_202016-08-10] 13,382 sequences; 46,487,794 total letters Query= NC_005832.1 Length=106332 Score E Sequences producing significant alignments: (Bits) Value seq5359 102 6e-17 >seq5359 Length=3099 Score = 102 bits (112), Expect = 6e-17 Identities = 216/319 (68%), Gaps = 20/319 (6%) Strand=Plus/Minus Query 25611 CACGTAAAACTG---ACACATGGTGTAGCACGGAGGAAGAGCTATAAGGCCCAAGTCTTT 25667 |||||||||||| | ||||| | |||||| || || || || || ||| Sbjct 2628 CACGTAAAACTGGGCAAACATG---TGGCACGGCGGCAGCGCCATCTTCTTCAGGTCGGC 2572 Query 25668 AGGGTTCCAGGCGCACACGATGATGCACCTGTCTTCTGGGTTGTCCCTGATA------AG 25721 |||||||| |||| || |||||||| || || | ||||||| ||||| | Sbjct 2571 CGGGTTCCACGCGCTCAGGATGATGCGCCGATCGTACGGGTTGTTCCTGAGCTTGTGGAC 2512 Query 25722 ATCCGCGGTGTTTTGCAGCTGATCCACCCCCATCCCCGAGTAGTCTGCCCTCATGTCCGT 25781 | || ||| |||||| || || ||| |||| |||||| |||||| ||| Sbjct 2511 AACCTCGGC------CAGCTGGTCGACGCCCTGGCCCGTGTAGTCGGCCCTCGCGTCGAC 2458 Query 25782 GTACTCTGCTCCGAAATACCTCCACTGGAACCCGTACACCGGTCCTAGGTCTCCATCTTC 25841 |||||| || || || | || |||||||||||||||||| || || ||||| || | || Sbjct 2457 GTACTCGGCGCCAAAGTGCCGCCACTGGAACCCGTACACGGGGCCCAGGTCGCCGGCCTC 2398 Query 25842 CCTGTGCTCAAAGCCCCTC-TTATCCAAAAAGTCTCTGGAACCATTGGCGTCCCAGATCT 25900 | ||| | |||||| | | || | | || | || || ||| |||||||||||| Sbjct 2397 GCGGTG-GCCCAGCCCCACGCTGTCGAGGTACTCGCGAGAGCCGTTGCCGTCCCAGATCT 2339 Query 25901 TTACCCCCTTCTCGGAGAG 25919 | || |||| || ||||| Sbjct 2338 TGACGCCCTGTTCCGAGAG 2320 Score = 91.5 bits (100), Expect = 1e-13 Identities = 183/265 (69%), Gaps = 6/265 (2%) Strand=Plus/Minus Query 25332 AAATCCTCTGCCTTAAAGTCGTCCAGGCTCTCCACC--CTCCTG-TTTATCCTCAGTGTG 25388 || ||||| |||| || |||| | ||| | || |||| | |||||| ||| | Sbjct 2993 AAGTCCTCGACCTTCCAGCCGTCTATGCTGCCGCCCGTCTCCCGCTTTATCTCCAGCTCG 2934 Query 25389 GGAAAGGGTCTGGGCTCCCTCTCGAGCTGAGTCTTCAGCGGTTCTACGTGATCCAGGTAG 25448 || ||| | ||||||||||| ||||| | |||||| || ||||| || |||| Sbjct 2933 GGGAAGTCGCGCGGCTCCCTCTCCAGCTGCACCCTCAGCGCGTCGACGTGGTCGGCGTAG 2874 Query 25449 ACGTGAGCGTCTCCCAGAGTGTG-GACAAACTCTCCCGGTTCTAGCCCGGTAACGTAAGC 25507 ||||| ||||| |||| ||| | || || ||||| | || || |||| || Sbjct 2873 ACGTGGGCGTCGCCCATGACGTGCGTCAGGCTG-CCCGGGACGAGGTCGCAGACGTGCGC 2815 Query 25508 CATCATGTACGTGAGGAGAAAGTAGCTGGCGATGTTAAAGGGTACCCCGAACCCCATGTC 25567 ||||||| ||| || || |||||||||||||||| ||||| || || | ||||||| Sbjct 2814 GATCATGTGCGTCAGCAGCGAGTAGCTGGCGATGTTGAAGGGGACGCCCAGGCCCATGT- 2756 Query 25568 CCCCCGACCTCTGGTAGAGCTGACA 25592 | | || | ||| || ||||| || Sbjct 2755 CGCAGGAGCGCTGATACAGCTGGCA 2731 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 340082125895886