Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaporthe_20helianthi_20[genbank_20GCA_5F001702395.1_202016-08-10] 13,382 sequences; 46,487,794 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq8706 107 3e-19 seq6053 98.7 2e-16 >seq8706 Length=2722 Score = 107 bits (118), Expect = 3e-19 Identities = 86/101 (85%), Gaps = 2/101 (2%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || |||||||| |||| |||| ||||| || |||||||| || ||||||||||| || || Sbjct 668 GCCAAGCGTCACCGCAAGATC-CTTCGTGACAACATCCAGGGTATCACCAAGCCCGCCAT 610 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTG 16532 ||| ||||| || ||||||||||| ||||||||| |||||| Sbjct 609 CCGACGTCTCGCCCGTCGTGGTGGTGTCAAGCGTATCTCTG 569 Score = 91.5 bits (100), Expect = 2e-14 Identities = 128/180 (71%), Gaps = 0/180 (0%) Strand=Plus/Minus Query 16529 TCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATC 16588 |||| | || ||||||| |||| ||| || | ||| |||||| || ||| ||| Sbjct 495 TCTGCAGTGATCTATGAGGAGACTCGCTCCGTCCTCAAGTCCTTCCTTGAGGGCGTCATC 436 Query 16589 CATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCTCCATGGATATC 16648 | ||| || || ||| ||||||||||| || || ||||| ||||| || |||| | Sbjct 435 CGTGACGCCGTCACCTACACCGAGCACGCCAAGCGCAAGACCGTCACATCTCTGGACGTT 376 Query 16649 GTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGGAAGTTAATCTTCTAAT 16708 ||||| || |||| || |||||||| | | |||||||| || ||||| | ||| || Sbjct 375 GTCTACGCCCTGAAGCGACAAGGCCGCACTCTGTATGGTTTCGGTGGTTAAACATCTCAT 316 >seq6053 Length=15401 Score = 98.7 bits (108), Expect = 2e-16 Identities = 84/101 (83%), Gaps = 2/101 (2%) Strand=Plus/Plus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || ||||| || |||| ||| |||||| || |||||||| || || |||||||| || || Sbjct 7656 GCCAAGCGCCACCGCAAGAT-TCTTCGTGACAACATCCAGGGTATTACCAAGCCCGCCAT 7714 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTG 16532 |||||||| |||||||||||||| || |||||| |||||| Sbjct 7715 TCGTCGTCTCGCTCGTCGTGGTGGTGTGAAGCGTATCTCTG 7755 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79062964743726