Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaporthe_20helianthi_20[genbank_20GCA_5F001702395.1_202016-08-10] 13,382 sequences; 46,487,794 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq12282 150 2e-31 seq7991 132 5e-26 seq4985 111 1e-19 seq11228 93.3 4e-14 >seq12282 Length=8984 Score = 150 bits (166), Expect = 2e-31 Identities = 352/519 (68%), Gaps = 23/519 (4%) Strand=Plus/Plus Query 46087 CCGTGCGTGCGCAAGAAAACCGACTGGGCGATGAAGTGGATCAACAGCAGCACCGCG--- 46143 || ||| | |||||||| |||||||||| ||||||||||| ||| |||||| Sbjct 7554 CCCTGCATCCGCAAGAAGGCCGACTGGGCTCTGAAGTGGATC-----CAGGACCGCGAGT 7608 Query 46144 --ACTTTCGCCGAGCGTATGGTGGCCTTTGCGATTGTGGAGGGCGTCtttttttCTGGCA 46201 || | ||| |||| |||| ||||| || ||||||||| |||| || ||| Sbjct 7609 CCACCTATGCCCAGCGACTGGTTGCCTTCGCTGCCGTGGAGGGCATCTTCTTCAGCGGCG 7668 Query 46202 GTTTTGCCGCCATCTTTTACATCAA-AACCAAGGGCATCATGCCCGGCCTGACGTTTAGC 46260 || ||| |||| || | |||| || | || | ||||||| |||||||| || | Sbjct 7669 CATTCGCCTCCATTTTCTGGCTCAAGAAGCGCGGTC-TCATGCCTGGCCTGACCTTCTCC 7727 Query 46261 AACGAGCTGATATCGCGCGACGAGGGCCTGCATACGGACTTTGCGTGTCTCTACTATAAC 46320 |||||||| || || || || ||||| ||||| || ||||| || |||||| || | | Sbjct 7728 AACGAGCTAATTTCTCGTGATGAGGGTCTGCACACCGACTTCGCTTGTCTC--CTGT-TC 7784 Query 46321 ACTCGCGTGCACGACAAGCTTGCG-CCCGACACCGTGCTGAGCATGT--TCAAGGAGGCG 46377 ||| | || | | || | | || | ||| |||| |||| || | ||| ||||| Sbjct 7785 TCTCACCTG-AGG--AATCGTCCGAGCAAACAGCGTGTTGAGGATATCATCACCGAGGCT 7841 Query 46378 GTGGCCATTGAGAAGGAGTTTTTTACGGCCGCACTGCCCGCTGCCCTGCTGGGCATGAAC 46437 || ||||| ||||||||||| || || | || ||||| ||||| || ||||||||| Sbjct 7842 GTTGCCATCGAGAAGGAGTTCTTGACCGAGGCTCTGCCATGCGCCCTCCTCGGCATGAAC 7901 Query 46438 GCACAGTCAATGTGCGACTACATCGAGTTTGTAGCGGACCGACTGCTCGTGCAGCTTCAC 46497 | | ||| | |||||||||||||| || ||||| || || || || | Sbjct 7902 TCCAACCTCATGAAACAGTACATCGAGTTTGTTGCCGACCGTCTACTGGTCGCTCTGGGC 7961 Query 46498 CAGCCGAAGCATTTTCACG-CGCGCAATCCATTTGAGTTTATGAACAACATCTCCCTGGA 46556 | |||| ||| || | | || || || || || ||| | |||||||| || | Sbjct 7962 AATGAGAAG-GTTTACAAGTCATCAAACCCCTTCGACTTCATGGAGAACATCTCTCTCGG 8020 Query 46557 GGGCAAAACTAATTTTTTCGAAAAGCGCGTCGGCGAGTA 46595 ||||| || || || || || ||||| || || || || Sbjct 8021 TGGCAAGACCAACTTCTTTGAGAAGCGTGTTGGTGACTA 8059 >seq7991 Length=9451 Score = 132 bits (146), Expect = 5e-26 Identities = 959/1517 (63%), Gaps = 57/1517 (4%) Strand=Plus/Plus Query 145058 TTGACGACCTGAAACTCGCCGGCCAACACACGACGCAAATACACGTTAGACGTGAAGGGT 145117 ||||||||||| |||||||| || | |||||| ||| || | ||| || ||| | || Sbjct 1514 TTGACGACCTGGAACTCGCCAGCGAGCACACGTCGCTGGTAGATGTTGGAGGTGTATGGC 1573 Query 145118 TCAAAAGACTCGTTATTGCCCAGGATTTGAGCGGTCGTTGCGGTGGGCATGTACGCCACC 145177 || || |||| || || |||||||| || | |||| || |||||||| |||| | Sbjct 1574 TCGAAGCACTCATTGTTACCCAGGATCTGCGACGTCGAAGCAGTGGGCATTGGTGCCAGC 1633 Query 145178 AATAATGAATTGCGCAGGCCGTGCTTCTTGATGTCTTCCTTTAGCGTACCCCAATCCCAT 145237 || || ||||| | || || |||||| | ||||| |||| | |||| ||||| Sbjct 1634 AACAAACTGTTGCGTACACCAGTCTCCTTGATCTTGTCCTTGAGCGCATCCCAGTCCCAA 1693 Query 145238 AGCGAAGTCGGCCTCACGTCCCACATGTCGTACTGCAAAATGCCCTCGCTGGCGGGGCTG 145297 || | ||| | || | ||||||||| |||||| ||||||| | | |||||| Sbjct 1694 AGGTCGGAAGGCTTGACATTCCACATGTCAAACTGCAGGATGCCCTGTGAGACTGGGCTG 1753 Query 145298 CCTTGAAAGGAACTGTAACTGCCCCAAGTTTTGGCGAGCTCGCAACTCGCCTCCA--GAG 145355 || | | | |||| |||| ||||| | || ||| | | || ||| Sbjct 1754 CCCTCGTATGTCTTGTATGGGCCCTCCACCTTGGCAATATC---ACTTG-ATGCAGTGAG 1809 Query 145356 CGCCGAA--ATAAATTGTCTCGGCAATTTGCCTGTTGAGCAGCATCGCTTCATCGCTCTC 145413 || | | || || |||||| || ||| | || ||| || || || Sbjct 1810 AGCAGCATGGTAGATGGTCTCGAAGATCTGCTTATTTAGCTCGCGAGCCTCTGGAGAGTC 1869 Query 145414 GTACGGCATGCGCAGCAGTACAAAAGCATCGGCGAGCCCCTGTATTCCCACGCCGATGGG 145473 | | |||||||| || | || || || || || ||||| | || || || || || Sbjct 1870 GAAAGGCATGCGAAGGGCCAAGAATGCGTCAGCAAGACCCTGAACACCGACACCAATAGG 1929 Query 145474 CCGATGTTTCATGTTGCTCATCCTCGCCGACTCGATAGGATATCGATTACGGTCGATAAT 145533 ||| ||| ||||||||| | ||| || || ||||| |||| || || || Sbjct 1930 CCGGTGTCGCATGTTGCTGTTATAGGCCTCCTTGACCGGATAGTGATTGACATCAATGAT 1989 Query 145534 TTTATTCAAGTTTCGCACTACTACCTTTGTAATGTGCCGCAACTTTTCAAAGTCAAACCG 145593 || |||| ||| || || | |||| |||| | |||||| | |||| | | Sbjct 1990 CTTGTTCAGGTTGCGGACGATGACCTGGGTAACCTCGTGCAACTGCTGGAAGTTGTAGC- 2048 Query 145594 AG-------CCTCGTCAACGACCACACAGCTATTGACGGCGATCGACGCCAAATTACAAA 145646 || | | ||||||| | ||| || || || || || ||||| || || | Sbjct 2049 AGTTGTTGTCGTAGTCAACG--TATGCAGGTA--GA--GCAATGGAGGCCAAGTTGCACA 2102 Query 145647 CTGCCGTCTCCTCGGCGTCGCTGTATTGTACGATCTCGGCGCACAAATTGCTACATTTGA 145706 | || ||| || | | | ||| | | |||||| | ||| | ||| | | | Sbjct 2103 CGGCGACCTCGTCCGGTGCACAGTACTCGATGATCTCTGTGCAGAGGTTGGAGCTTCGAA 2162 Query 145707 TGGTTCCCAGATTTTGCTGATTACTTTTCCTG-TTGCACGCGTCCTTGTAGAGCATGTAC 145765 |||| ||||| || | ||| || || || | | |||| | |||||| || |||||| | Sbjct 2163 TGGTACCCAGGTTCTTCTGGTTGCTCTTGCGGTTTGCGTG-GTCCTTATACAGCATGAAG 2221 Query 145766 GGTCCGCCAGTCTCCACCTGCGTCTCCACGATAAAACGGTGCAAGTCCTGCGCACGCACC 145825 || ||||||||| ||| | || | ||| | || | ||| || || Sbjct 2222 GGGTTGCCAGTCTCGGTCTGAGCTTCGAGAATAGCATACCACAGCTTCTGGGCCTTCA-- 2279 Query 145826 TGCTGCTGGTA--GCGGCCCTCTTCTTCGTATTTCCTGTAGAGCTCCTCAAACGCGGAAC 145883 || | || | |||||||| | ||||| | | |||||| |||| ||| | | Sbjct 2280 TGGTCTTGCGACCTCGGCCCTCCTTCTCGTACTGCTCGTAGAGAGCCTCGAACTCATCGC 2339 Query 145884 CGTAGCAATCGGACAGGCCGGGACACTTGTTGGGACACATCAGCGACCATACGCCGTTGG 145943 ||||||| |||| ||||| ||||||| ||| ||||||||||| | ||| | ||||| Sbjct 2340 CGTAGCAGTCGGCGAGGCCAGGACACTCGTTAGGACACATCAGGGTCCAGTCACCGTTCT 2399 Query 145944 CGTTGACGCGCTCCATAAACAAATCTGGCACCCACAGCGCGTACATCAAGTCGCGCGCTT 146003 | ||| |||| ||| || | ||| || | ||| || || | | || || ||| Sbjct 2400 TCTCGACCCGCTTCATGAAAAGATCGGGGATCCAGAGGGCAAGGAAAAGATCACGGGCTC 2459 Query 146004 TGCAATCCTCAGCACCCATGTT-TCGCTTCAAATTAAGCACACT-ATAGATGTCCGCGTG 146061 | ||||| || ||| | || || | ||| | ||| | ||| || ||||| Sbjct 2460 GGATCTCCTCCTTGCCGTGGTTCTTGC-GCAGGTCAAGGA-ACTCAAAGACATCAGCGTG 2517 Query 146062 CCACGGTTCAATATAGACGGCGAGGGCTCCTTTTCG---TTTGCCACCCTGGTCCACGTG 146118 ||| || |||| |||| || | || || || ||||| ||||| || |||| Sbjct 2518 CCATGGCTCAAGGTAGATAGCAAAAGCACCAGGACGCTTATTGCCGCCCTGATCGACGTA 2577 Query 146119 ACGTACCATGTTGTTAAAGACGCGCACCATGGGCTCGACGCCGCTGGCTACGCCGTTCGT 146178 || | ||||||| ||||| |||| ||| || || ||| | | | |||||| || Sbjct 2578 TCGGGCGGTGTTGTTGAAGACCCGCAGCATTGGTGTGATGCCATTAGATGTGCCGTTAGT 2637 Query 146179 ---AGAG-TTTATTCTGGTGCCGCGGGAGCGCACGCAATGAACATTCACGCCGAGACC-G 146233 || | | ||| | |||| || || | || || || |||| |||| ||| Sbjct 2638 GCCAGCGATGTAT----GAGCCGGTGGCACGGATGCGGTGCACGTTCAGACCGATACCAC 2693 Query 146234 CCGCCGTACTTGGATATAGCGGCGC-AGTCGCCGAGCGTCTCGTAGATGCCGTCAATGCT 146292 ||||| | |||||| || || | |||| ||| || ||||| ||||| || ||||| Sbjct 2694 CCGCCAT-CTTGGAGATCATAGCACAAGTC-TTGAGGGTGTCGTAAATGCCCTCGATGCT 2751 Query 146293 ATC--GCTTCGAATGCCGAGCAGAAAGCACGAGCACATCTGCGCCATCGGCGTCCCCGCC 146350 || |||| ||| ||| || ||||| || ||| ||| | | ||||| || || Sbjct 2752 GTCCTCCTTC--ATGTCGACAAGGAAGCATGATGACAACTGGGGCTGAGGCGTGCCAGCA 2809 Query 146351 GAGAACAACGTCGGGCTCGCGTGCGTAAACA--TTTTTCGGCTCATCATCCGATACGTTT 146408 |||||| || || || || || || | || || | ||||| || || | Sbjct 2810 TTGAACAAAGTGGGCGAGGCATGTGTGAAGAACTTATTTG--ACATCAGGTTGTAGGTCT 2867 Query 146409 CGAT-AGCGTCTTGAATGTCGTCGCCATGAATGCCCAAAGCGACGCGCATGAGCATGTGT 146467 |||| | | ||| | | ||||| || || || | |||||| ||||||| ||||||| Sbjct 2868 CGATGACCCTCTCG-ACATCGTCTCCCCAGATACCGACAGCGACACGCATGATCATGTGT 2926 Query 146468 TGGGGCCGCTCCGCCACTTGATTGTCAATCTTTAACAAATAGCCGTTCTCCAGGGTTTTG 146527 || || ||||| | |||| | || | ||| | | || | ||| ||||| ||| Sbjct 2927 TGTGGTCGCTCAACAACTTTACCATCGAGCTTGAGGAGGTACGAGCGCTCGAGGGTCTTG 2986 Query 146528 TATCCGAAAAATTTGTA 146544 | ||||| ||| ||| Sbjct 2987 AAGCCGAAGTATTGGTA 3003 >seq4985 Length=7965 Score = 111 bits (122), Expect = 1e-19 Identities = 105/134 (78%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| |||| |||||||| | || | ||| |||||||| || |||||||| ||| Sbjct 7812 CCACCACGCAGGCGCAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAG 7871 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| |||||| ||||||||||| ||| |||| | |||||||||||| || || Sbjct 7872 AGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCTGGGGGA 7931 Query 131128 ATTCCTTCTTTGTC 131141 || ||||| ||||| Sbjct 7932 ATGCCTTCCTTGTC 7945 >seq11228 Length=3802 Score = 93.3 bits (102), Expect = 4e-14 Identities = 158/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 |||||| |||| ||| ||||| || || | |||||||||||||| |||||||| || Sbjct 374 GCCACCCCGCAGACGAAGCACCAAGTGCAGCGTCGACTCCTTTTGGATGTTGTAGTCAGA 315 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 || || || || || | ||||||||| ||| | || | ||| |||||||| || || Sbjct 314 CAGTGTCCGGCCATCTTCCAACTGCTTGCCAGCGAAAATAAGACGTTGCTGGTCTGGTGG 255 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 ||| || || ||||| || || ||||| | || | || || | ||||||| Sbjct 254 GATGCCCTCCTTGTCCTGAATCTTAGACTTGACGTTGTCGATTGTGTCTGATGACTCGAC 195 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235 || | || | || || || || | || || || || ||||||||| Sbjct 194 TTCAAGAGTGATCGTCTTTCCCGTCAAGGTCTTGACAAAGATCTGCATG 146 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 471933844058880