Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaporthe_20helianthi_20[genbank_20GCA_5F001702395.1_202016-08-10] 13,382 sequences; 46,487,794 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq11228 122 7e-23 >seq11228 Length=3802 Score = 122 bits (134), Expect = 7e-23 Identities = 145/197 (74%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || ||||| || || || || || || ||| ||||||||||||| || | | Sbjct 147 ATGCAGATCTTTGTCAAGACCTTGACGGGAAAGACGATCACTCTTGAAGTCGAGTCATCA 206 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | ||| | |||| || ||||| ||||||||||| || ||||| || || Sbjct 207 GACACAATCGACAACGTCAAGTCTAAGATTCAGGACAAGGAGGGCATCCCACCAGACCAG 266 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 ||||||||||| || || ||||| ||||| || ||| ||| || | || || |||||| Sbjct 267 CAACGTCTTATTTTCGCTGGCAAGCAGTTGGAAGATGGCCGGACACTGTCTGACTACAAC 326 Query 22399 ATTCAAAAAGAATCCAC 22415 || ||||| || || || Sbjct 327 ATCCAAAAGGAGTCGAC 343 Score = 87.8 bits (96), Expect = 2e-12 Identities = 87/113 (77%), Gaps = 0/113 (0%) Strand=Plus/Plus Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362 || || || ||||||||||| ||||| || || || || ||||| || ||||| || || Sbjct 3 AAGATCCAGGACAAGGAGGGCATTCCTCCTGACCAGCAGCGTCTGATCTTTGCTGGAAAG 62 Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCAC 22415 ||| | |||||| ||| ||| |||| || |||||||| || || ||||| || Sbjct 63 CAGCTTGAGGATGGCCGAACCCTCTCGGACTACAACATCCAGAAGGAATCTAC 115 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419659545248830