Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaporthe_20helianthi_20[genbank_20GCA_5F001702395.1_202016-08-10] 13,382 sequences; 46,487,794 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq12282 111 3e-19 seq1754 109 1e-18 seq7991 95.1 2e-14 >seq12282 Length=8984 Score = 111 bits (122), Expect = 3e-19 Identities = 249/368 (68%), Gaps = 12/368 (3%) Strand=Plus/Minus Query 251563 TCGAAGAAATTAGACTTGCCCTCCAGAGAGATTAGCTCCATGAAGTCGAAGGGGTTTGTG 251622 || ||||| || | |||||| | |||||||| ||||||||||||||||||||||| Sbjct 8041 TCAAAGAAGTTGGTCTTGCCACCGAGAGAGATGTTCTCCATGAAGTCGAAGGGGTTTGAT 7982 Query 251623 GCATTGTACTGCTTGGGATGGCCAAGTGCTACGAAGATGCGGTCTGCCACAAACTCCAGA 251682 | ||||| ||| || ||| || || || | | ||||| || |||||||| | Sbjct 7981 GACTTGTAAACCTTCTCATTGCCCAGAGCGACCAGTAGACGGTCGGCAACAAACTCGATG 7922 Query 251683 TACTGTCCCATCAGTTCAGAGTTCATGCCAATCATACGACAAGGAATTGCCTCACAGATG 251742 |||||| ||| || | ||||||||||| | | || || | ||||| | | Sbjct 7921 TACTGTTTCATGAGGTTGGAGTTCATGCCGAGGAGGGCGCATGGCAGAGCCTCGGTCAAG 7862 Query 251743 AATTCCTTTTCGTTGGCAACTGCCTCCTCCACAATTGCCTTCAC---CTG--TGCCAGAG 251797 || ||||| ||| ||||||| ||||| | || ||| || ||| ||| | | Sbjct 7861 AACTCCTTCTCGATGGCAACAGCCTCGGTGATGATATCCTCAACACGCTGTTTGCTCG-G 7803 Query 251798 ACAGCTTGTTCTCCAGCTTTGAGTACAGGAG-CTCGCCAAACTGTTGGTGCAGACCCTCG 251856 || ||| ||| | ||| ||||||| | || || | | |||||||||||| Sbjct 7802 AC----GATTCCTCAGGTGAGAGAACAGGAGACAAGCGAAGTCGGT-GTGCAGACCCTCA 7748 Query 251857 TCGCGACTGATGAACTCGTTGGACAGACCCAGGCCAGGCATCACCCCACGGTTCCTGAGC 251916 || ||| || | ||||||||| | |||||||||||| | || || ||| ||||| Sbjct 7747 TCACGAGAAATTAGCTCGTTGGAGAAGGTCAGGCCAGGCATGAGACCGCGCTTCTTGAGC 7688 Query 251917 CAGAAGAT 251924 ||||| || Sbjct 7687 CAGAAAAT 7680 >seq1754 Length=10432 Score = 109 bits (120), Expect = 1e-18 Identities = 154/214 (72%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 279351 GATCTGTGTGACTGTGATTTCTCGCTCGCATATGGTGGGAAGATTCTGCTAAACTCTACC 279410 || || || || ||||| ||||||||||| || |||| ||||| ||||| ||| ||| Sbjct 5403 GACCTCTGCGAGTGTGAGTTCTCGCTCGCCTACGGTGCCAAGATCCTGCTCAACAACACC 5462 Query 279411 CGCCTCAACATCAAGCGTGGCAACCGGTATGGTCTCATCGGTCCCAATGGAGCGGGTAAG 279470 ||| || | ||||||||||| || || |||||| ||||||||| || || || ||| Sbjct 5463 CGCATCCGCCTCAAGCGTGGCCGTCGTTACGGTCTCTGCGGTCCCAACGGTGCCGGAAAG 5522 Query 279471 AGCACTCTAATGCGCGCCATTGCAAACGGTCAGCTGGAAGGATTTCCTAACGCA-TCTGA 279529 ||| || ||||| ||||| |||| || | | ||| ||||| | ||| || Sbjct 5523 TCCACCCTCATGCGTGCCATCAACAACGAGCAAGTCG-AGGGTTTCCCCAAGCAGAGCGA 5581 Query 279530 GGTAAGGACAGTGTATGTAGAGCACGACATCGAC 279563 ||| | ||| |||| || ||||||||| | ||| Sbjct 5582 GGTCAAGACTGTGTTCGTTGAGCACGACCTTGAC 5615 Score = 84.2 bits (92), Expect = 4e-11 Identities = 92/120 (77%), Gaps = 2/120 (2%) Strand=Plus/Plus Query 280704 CACTCTCGCATTCGCGGTCTTTCTGGAGGCCAGAAGGTCAAACTTGTCATCGGAGCA-GC 280762 ||||||||||| ||||| ||||| || ||| ||||| | ||| | | || || Sbjct 6801 CACTCTCGCATGAAGGGTCTGTCTGGCGGTCAGCGTGTCAAGGTCGTCCTGGCTGCCTGC 6860 Query 280763 TCTGTGGCAACACCCTCACGTGATCGTTCTCGACGAGCCTACCAACTATCTGGACCGCGA 280822 ||| ||||| | |||||| ||||||| |||||||||||||||||||| || ||||| || Sbjct 6861 TCT-TGGCAGCGACCTCACCTGATCGTCCTCGACGAGCCTACCAACTACCTTGACCGTGA 6919 >seq7991 Length=9451 Score = 95.1 bits (104), Expect = 2e-14 Identities = 180/264 (68%), Gaps = 1/264 (0%) Strand=Plus/Plus Query 293115 CTGCGTCTGATCGACAAAGGCACCACGATCAGCAGCGAGGTCAATCACTGTCTTCATAGA 293174 ||| | ||| || | |||||||||||| ||||||| | | | | ||| || ||| Sbjct 1309 CTGAGACTGGTCAATAAAGGCACCACGGTCAGCAGACATCTGCACAATGGTCCTCTGAGA 1368 Query 293175 GATCTCCCACGATGTCTTGTACACTGCCTTGACATCAGGATGAATGCCAATAACCTTCTG 293234 ||||||||| |||||||| | ||||||| ||||| | |||| || |||| Sbjct 1369 GATCTCCCAGACGGTCTTGTAAAGGGCCTTGATATCAGCCGGGATGCTGGGAATGCTCTG 1428 Query 293235 GATAGACCCTCCGTTGGCAATAATCTGGTTCTTCATTGTCTCGGACCAAGTCCCACGAGC 293294 ||| || || | | ||| ||||| |||||||||| | ||| ||||| ||| | | Sbjct 1429 GATGGAACCATCCTCGGCGATAATACGGTTCTTCATGGCCTCAGACCACAAGCCAAGCTC 1488 Query 293295 AATGAGCTCGCGGACAAGGTAAGAGTTGACAACGGGGAACTCACCAGCGAGAGTGCGACG 293354 | || || | || ||| | | |||||| || ||||||| |||||||| || || Sbjct 1489 TGTCAGATCCCTGAGAAGCCACGGGTTGACGACCTGGAACTCGCCAGCGAGCACACGTCG 1548 Query 293355 GCTGTAAATGTTCGAAGTG-ATGG 293377 ||| ||||| || ||| |||| Sbjct 1549 CTGGTAGATGTTGGAGGTGTATGG 1572 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027660570314262