Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaporthe_20helianthi_20[genbank_20GCA_5F001702395.1_202016-08-10] 13,382 sequences; 46,487,794 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq7991 356 4e-93 seq12282 259 9e-64 >seq7991 Length=9451 Score = 356 bits (394), Expect = 4e-93 Identities = 899/1356 (66%), Gaps = 37/1356 (3%) Strand=Plus/Plus Query 244090 GTTCACCACCTGAAACTCTCCCGACAGCACGCGGCGCTGGTAGAGGTTGCTGCTGAGCGG 244149 ||| || ||||| ||||| || | ||||| || |||||||||| |||| | || || Sbjct 1513 GTTGACGACCTGGAACTCGCCAGCGAGCACACGTCGCTGGTAGATGTTGGAGGTGTATGG 1572 Query 244150 CTCGATGCTCTCCGTGTTGCCCAGTATCTGCGCCGTGCTCGCAGTCGGCATGGGCGACAC 244209 ||||| || ||| |||| ||||| ||||||| ||| ||||| ||||| || | || Sbjct 1573 CTCGAAGCACTCATTGTTACCCAGGATCTGCGACGTCGAAGCAGTGGGCATTGGTGCCAG 1632 Query 244210 CAGCAGACTGTTCCTCACGCCGTGCCTCTGGATGCGGAGTCTGAGCTCGTTCCAGTCCCA 244269 || || |||||| | || || | || ||| | ||||| | | ||||||||| Sbjct 1633 CAACAAACTGTTGCGTACACCAGTCTCCTTGATCTTGTCCTTGAGCGCATCCCAGTCCCA 1692 Query 244270 CATGCCCGAGAGGTCCTCGCGTTTGAGGCCCCACATGTCAAACTGCAGCAGCCCCTTGCT 244329 | | | || ||| |||| |||||||||||||||||| | |||| Sbjct 1693 AAGGTCGGA-AGGC--------TTGACATTCCACATGTCAAACTGCAGGATGCCCTGTGA 1743 Query 244330 GACGGGGCTGCCCTCGTAGGTCGGGTAGGGACCGTCGCGCTGGGCCAGCTTACA-GCTCT 244388 ||| |||||||||||||| ||| ||| || || || || ||| | | || | | Sbjct 1744 GACTGGGCTGCCCTCGTATGTCTTGTATGGGCCCTCCACCTTGGCAATATCACTTGATGC 1803 Query 244389 CGTCGAGGGCGGCGTAGTAGATGGTCTCGAAGATCATCTTGTTCATGTCGCGGGCCT-TG 244447 || ||| || || | ||||||||||||||||||| ||| || | ||||| |||| || Sbjct 1804 AGT-GAGAGCAGCATGGTAGATGGTCTCGAAGATCTGCTTATTTAGCTCGCGAGCCTCTG 1862 Query 244448 CCGCAGGTGAAGGGGATGCCCATCATCATGAAGACGTCGGCCAGTCCCTGCACGCCGATG 244507 | || ||| || |||| | || ||| |||| || || ||||| || |||| Sbjct 1863 GAG-AGTCGAAAGGCATGCGAAGGGCCAAGAATGCGTCAGCAAGACCCTGAACACCGACA 1921 Query 244508 CCGATGGGTCTGTGTCGCTTGTTGGAGCGCATGGCTTCGGGCACGGGGTAAAAGTTGCCG 244567 || || || | ||||||| ||||| | ||| || || || || ||| | Sbjct 1922 CCAATAGGCCGGTGTCGCATGTTGCTGTTATAGGCCTCCTTGACCGGATAGTGATTGACA 1981 Query 244568 TCGATCACCTTGTTGAGGTTGCGGGTGATCATGCGGACGACGTCGGCCAGCAGCTGAAAG 244627 || || | |||||| ||||||||| ||| | || || ||| || | |||| ||| Sbjct 1982 TCAATGATCTTGTTCAGGTTGCGGACGATGACCTGGGTAACCTCGTGCAACTGCTGGAAG 2041 Query 244628 TCGTACTCGTAGGGATCCTCGGCGATGGTGATCCTCACAAACTCGTTGAGGGCGACGCTG 244687 | ||| || | | | || | || | | | | | || ||| | | | | Sbjct 2042 TTGTAGCAGTTG------TTGTCG-TAGTCAACGT---ATGCAGGTAGAG--CAATGGAG 2089 Query 244688 GCCAGGTTGCAGACGGCCACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCAGAGG 244747 |||| |||||| ||||| ||||| |||| ||||| || ||||| ||||||||| Sbjct 2090 GCCAAGTTGCACACGGCGACCTCGTCCGGTGCACAGTACTCGATGATCTCTGTGCAGAGG 2149 Query 244748 TTACTGCACTTGATGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTCCTTG 244807 || || ||||| ||||||| || || ||| |||| ||| | |||||| Sbjct 2150 TTGGAGCTTCGAATGGTACCCAGGTTCTTCTGGTTGCTCTTGCGGTTTGCGTGGTCCTTA 2209 Query 244808 TAGAGCATGAAGGGCCCCCCGGTCTCGAGCTGGGCGACGAGGACGCTGTTCCAGAGGTCC 244867 || ||||||||||| || |||||| ||| || |||| | | ||| || | | Sbjct 2210 TACAGCATGAAGGGGTTGCCAGTCTCGGTCTGAGCTTCGAGAATAGCATACCACAGCTTC 2269 Query 244868 CTAGCCTTGACCGTCCTGCGAGCCTTGCCCTCTGCCTCGTAGCGGGTGTACAGGGCCTCG 244927 ||||| | ||| ||||| | |||||| |||||| | ||| || |||||| Sbjct 2270 TGGGCCTTCATGGTCTTGCGACCTCGGCCCTCCTTCTCGTACTGCTCGTAGAGAGCCTCG 2329 Query 244928 AACTCGGGGCCCCAGACCTCGTCTAGGCCGGGGCACGACGCCGGGCACATGAGACTCCAC 244987 ||||| ||| || ||| | ||||| || ||| || ||||| || |||| Sbjct 2330 AACTCATCGCCGTAGCAGTCGGCGAGGCCAGGACACTCGTTAGGACACATCAGGGTCCAG 2389 Query 244988 TCGCCGCCGTCCTTGACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGAAGAGG 245047 || ||| | || ||||| || |||||| || ||||||||||||||||| |||| || Sbjct 2390 TCACCGTTCTTCTCGACCCGCTTCATGAAAAGATCGGGGATCCAGAGGGCAAGGAAAAGA 2449 Query 245048 TCCCTGGTCCTCTG--CTCGTCCGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTCAAAGA 245105 || | || ||| | ||| ||| ||| |||||| | ||| || | || ||||||| Sbjct 2450 TCACGGG--CTCGGATCTCCTCCTTGCCGTGGTTCTTGCGCAGGTCAAGGAACTCAAAGA 2507 Query 245106 CGTCGACGTGCCAGGGCTCCATGTAGACAGCGAGGGCGCCGGGCCGCTTGTTGCCTCCCT 245165 | || ||||||| ||||| | ||||| ||| | || || || ||||| ||||| |||| Sbjct 2508 CATCAGCGTGCCATGGCTCAAGGTAGATAGCAAAAGCACCAGGACGCTTATTGCCGCCCT 2567 Query 245166 GGTCCACCATCCTCTCGAGCG----CGTTGAAGATGCGCAGGGTAGGCACTATGCCGTTA 245221 | || | | | ||| ||| |||||||| ||||| | || ||||| ||| Sbjct 2568 GATCGA----CGTATCGGGCGGTGTTGTTGAAGACCCGCAGCATTGGTGTGATGCCATTA 2623 Query 245222 GAGTGGCCGTTGGTGCCCTTGATGTAGGCGCCCTTGCCCCTGAGGTTGCTGATGGACATG 245281 || |||||| ||||| |||||| | ||| || | | || | | | | || Sbjct 2624 GATGTGCCGTTAGTGCCAGCGATGTATGAGCCGGTGGCACGGATGCGGTGCACGTTCAGA 2683 Query 245282 CCTAGTCCGCCGGCGTGCTTGGAGATGAGGGCGCAGCTCTTGATGGTGTCTGCTATGCCC 245341 || | || || || ||||||||| | || || |||||| |||||| |||||| Sbjct 2684 CCGATACCACCCGCCATCTTGGAGATCATAGCACAAGTCTTGAGGGTGTCGTAAATGCCC 2743 Query 245342 TCCATGCTGTCCGACTTCATGTTGAGCAGAAAGCAGGAGGACAGCTGGGGCTTGGGGCTG 245401 || ||||||||| |||||||| || || ||||| || |||| |||||||| || || Sbjct 2744 TCGATGCTGTCCTCCTTCATGTCGACAAGGAAGCATGATGACAACTGGGGCTGAGGCGTG 2803 Query 245402 CACGAGTTGAACAGAGTGGGGCTGGCGTGGGTAAAG 245437 | | ||||||| |||||| ||| || || ||| Sbjct 2804 CCAGCATTGAACAAAGTGGGCGAGGCATGTGTGAAG 2839 >seq12282 Length=8984 Score = 259 bits (286), Expect = 9e-64 Identities = 370/515 (72%), Gaps = 7/515 (1%) Strand=Plus/Plus Query 42633 CCCTGCATCAAGAAGAAGGCGGACTGGGCGCTCAACTGGATCGAGAGTCCCGACGCAACG 42692 ||||||||| |||||||| |||||||| || || |||||| || | ||| | || Sbjct 7554 CCCTGCATCCGCAAGAAGGCCGACTGGGCTCTGAAGTGGATCCAGGACCGCGAGTCCACC 7613 Query 42693 TTCGGCGAGAGGCTGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTC 42752 | | | || | ||||| ||||| | ||||| ||||||||||||||| ||||| ||| Sbjct 7614 TATGCCCAGCGACTGGTTGCCTTCGCTGCCGTGGAGGGCATCTTCTTCAGCGGCGCATTC 7673 Query 42753 GCCTCCATCTTCTGGCTCAAGCAG-AAGGTGTCGATGCCCGGACTCACCTTCTCGAACGA 42811 |||||||| |||||||||||| || ||| || ||||| || || |||||||| ||||| Sbjct 7674 GCCTCCATTTTCTGGCTCAAGAAGCGCGGTCTC-ATGCCTGGCCTGACCTTCTCCAACGA 7732 Query 42812 ACTCATCAGCAGGGACGAGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCA 42871 || || | || ||||| ||||| | ||||| || || ||||||||||| || Sbjct 7733 GCTAATTTCTCGTGATGAGGGTCTGCACACCGACTTCGCTTGTCTCCTGTTCTC---TCA 7789 Query 42872 CCTCAGGCACAAGCCCTCGAAGGAGCGGGTCCGGGCCATCATCACGGAGGCCGTGGAGAT 42931 ||| ||| | || || |||| || || |||||||| ||||| || | || Sbjct 7790 CCTGAGGAATCGTCCGAGCAAACAGCGTGTTGAGGATATCATCACCGAGGCTGTTGCCAT 7849 Query 42932 CGAGAAGGAGTTCCTCACGCAGTCGCTGCCCGTGTCCCTGGTCGGCATGAACCACGACCT 42991 ||||||||||||| | || || | ||||| |||| ||||||||||| | |||| Sbjct 7850 CGAGAAGGAGTTCTTGACCGAGGCTCTGCCATGCGCCCTCCTCGGCATGAACTCCAACCT 7909 Query 42992 CATGTGCAAGTACATCCAGTACGTCGCCGACCATCTCCTGTGCCAGATGGG-TCTCAGCC 43050 |||| |||||||| ||| || ||||||| ||| ||| | |||| | || Sbjct 7910 CATGAAACAGTACATCGAGTTTGTTGCCGACCGTCTACTGGTCGCTCTGGGCAATGAGAA 7969 Query 43051 GCCTCTACAACACGCCGTGCCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGCAAGA 43110 | | ||||| | | |||||||||||| |||||||||||||| | | ||||||| Sbjct 7970 G-GTTTACAAGTCATCAAACCCCTTCGACTTCATGGAGAACATCTCTCTCGGTGGCAAGA 8028 Query 43111 CCAACTTTTTCGAGAAGCGCGTCGCCGACTACCAG 43145 ||||||| || |||||||| || | ||||||||| Sbjct 8029 CCAACTTCTTTGAGAAGCGTGTTGGTGACTACCAG 8063 Score = 111 bits (122), Expect = 3e-19 Identities = 215/310 (69%), Gaps = 13/310 (4%) Strand=Plus/Plus Query 42300 ATCTGGTCCATGTACAAGAAGGC-GCAGTTCTCCAACTGGACCGCCGAGGAGATTGACCT 42358 |||||| |||||||||||| | || | || |||||| || ||||||||||| || Sbjct 7160 ATCTGGCAGATGTACAAGAAGCATGAAGCT-TCGTTCTGGACTGCTGAGGAGATTGATCT 7218 Query 42359 GGCCAAGGACACGGCCGGCTGGGAGTCACTGTCTGAGA-ACGAAAAG---TTTTTCCTCA 42414 ||||||||| | || |||| || || | |||| |||| || | ||| || Sbjct 7219 CTCCAAGGACATGCACGACTGG-AGCAACCGCCTGACCGACGACGAGCGATACTTCATCT 7277 Query 42415 AAAACATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCA 42474 |||| || ||||||||||| || || || || || ||||| |||||||||| Sbjct 7278 CCCACATCCTCGCCTTCTTCGCTGCTTCGGATGGAATCGTCAACGAGAACCTGGTGGAGC 7337 Query 42475 GGTTCATGAAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCA 42534 | |||| ||||| ||| | ||||| || ||||||||||| |||||||| | Sbjct 7338 GCTTCAGCGGCGAGGTTCAGATCCCAGAGGCTCGTTGCTTCTACGGATTCCAGATCATGA 7397 Query 42535 TAGAGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCA---ACACGTACATCCTGGATC 42591 | |||||| | ||||| ||| |||| | ||||||| |||| |||||| ||| | Sbjct 7398 TGGAGAACATCCACTCCGAGACGTACTC---GCTGCTCATCGACACCTACATCAAGGAGC 7454 Query 42592 CCGTCGAGCG 42601 ||| | |||| Sbjct 7455 CCGCCCAGCG 7464 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944181235660320